Job Description A1Y9I9 Confidence 99.10% Date Wed Jul 10 14:16:46 BST 2013 Rank 143 Aligned Residues 133 % Identity 22% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		H	M	G	P	V	K	G	Q	I	L	M	R	L	V	E	E	.	.	.	.	.	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																							.	.	.
Template Conservation																																													.	.	.
Template Sequence		K	V	D	P	A	S	L	L	L	L	E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	R	.	.	.	M	G	A	E	V	V	G	V	E	D	D	L	A	S
Template Known Secondary structure		S																		T	T	T	T	T	T							T		T	T	S	T	T							.	.	.	T	T								S	B
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.
Query Sequence		A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	.	.	.	.	.	.	.	.	H	R	P	R	Y
Query Conservation																																																	.	.	.	.	.	.	.	.
Alig confidence																.	.	.												.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																.	.	.												.	.	.	.	.	.
Template Sequence		V	L	S	L	Q	K	G	L	E	A	N	A	L	K	.	.	.	A	Q	A	L	H	S	D	V	D	E	A	.	.	.	.	.	.	L	T	E	E	A	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	L	D	V
Template Known Secondary structure												T	T			.	.	.							S	T	T	T	T	.	.	.	.	.	.	S		T	T														T	T		S	S
Template Predicted Secondary structure																.	.	.												.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	.	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C
Query Conservation																						.
Alig confidence													.	.								.
Template Conservation													.	.
Template Sequence		A	Q	A	F	V	N	V	A	A	A	R	.	.	L	R	P	G	G	V	F	F	L	V	S	N	P	F	L	K	Y	E	P	L	L	E	E	K	F	G	A	F
Template Known Secondary structure													.	.													T	T	S											S
Template Predicted Secondary structure													.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D