Job Description A1Y9I9 Confidence 99.33% Date Wed Jul 10 14:16:46 BST 2013 Rank 79 Aligned Residues 110 % Identity 13% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	.	.	A	G	F	D	E
Query Conservation																																																							.	.
Alig confidence																													.																										.	.
Template Conservation																													.
Template Sequence		L	C	S	H	P	K	P	E	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	.	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D
Template Known Secondary structure			T	T	S	S											T	T	S							T	T		.	T	T									S																	G	G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	.	.	.	.	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T
Query Conservation																																								.	.	.	.
Alig confidence																					.	.	.	.																.	.	.	.											.	.
Template Conservation																					.	.	.	.																														.	.
Template Sequence		P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q	T	P	D	.	.	.	.	N	T	Y	D	V	V	I	I	D	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L	R	I	.	.	L	K	P	D	G	I
Template Known Secondary structure		T	T						S								T	S		T	.	.	.	.	T										S						S	S												.	.
Template Predicted Secondary structure																					.	.	.	.																														.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.
		207	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	C	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		206	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D