Job Description A1Y9I9 Confidence 54.31% Date Wed Jul 10 14:16:46 BST 2013 Rank 453 Aligned Residues 140 % Identity 16% Template c2wa1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:non-structural protein 5; PDBTitle: structure of the methyltransferase domain from modoc virus,2 a flavivirus with no known vector (nkv) Resolution 2.00 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	W	S	S	C	C	E	Y	L	S	H	M	G	P	V	K	G	Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		E	F	M	A	Y	R	R	R	F	V	V	S	R	G	T	A	K	L	A	W	I	D	E	R	G	G	V	E	L	K	G	T	V	V	D	L	G	C	G	R	G	S	W	S	Y	Y	A	A	S	Q	P	N	.	V	R	E	V	K	A	Y
Template Known Secondary structure									T	T															T	T	S											T		T	T	S								T	S	T	T	.
Template Predicted Secondary structure																																																						.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																	.	.	.																																							.	.	.	.
Query SS confidence																	.	.	.																																							.	.	.	.
Query Sequence		E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	.	.	.	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	.	.	.	.
Query Conservation																	.	.	.																																							.	.	.	.
Alig confidence							.	.	.	.	.	.					.	.	.																							.	.	.	.	.	.	.										.	.	.	.
Template Conservation							.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Sequence		T	L	G	T	S	.	.	.	.	.	.	G	H	E	K	P	R	L	V	E	T	F	G	W	N	L	I	T	F	K	S	K	V	D	V	T	K	M	E	P	.	.	.	.	.	.	.	F	Q	A	D	T	V	L	C	D	I	G	E	S
Template Known Secondary structure					S	T	.	.	.	.	.	.	T	S									T	T	G	G	G						S			T	T	T				.	.	.	.	.	.	.				S
Template Predicted Secondary structure							.	.	.	.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.
							183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																												.
Template Conservation																																		.
Template Sequence		N	P	T	A	A	V	E	A	S	R	T	L	T	V	L	N	V	I	S	R	W	L	E	Y	N	Q	G	C	G	F	C	V	.	K	V	L	N	P	Y	S	C	D	V	L	E	A	L
Template Known Secondary structure			S	S																						S	T	T						.			S				S
Template Predicted Secondary structure																																		.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D