Job Description A1Y9I9 Confidence 98.49% Date Wed Jul 10 14:16:46 BST 2013 Rank 250 Aligned Residues 105 % Identity 15% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		N	L	V	R	K	V	S	E	L	V	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	G	.	.	.	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N
Template Known Secondary structure													S	S						T		T	T	T								T	T	T	.	.	.								S															T	T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	.	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T
Query Conservation																																											.
Alig confidence					.	.									.	.	.	.	.	.	.	.	.																				.										.	.	.
Template Conservation					.	.									.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		V	D	A	.	.	E	F	E	V	A	S	D	R	.	.	.	.	.	.	.	.	.	E	V	S	V	K	G	F	D	T	V	I	V	D	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	.	.	.	E	K	P	G	V	I
Template Known Secondary structure					.	.							T	T	.	.	.	.	.	.	.	.	.	T				T	T		S								T	T		S											.	.	.				S
Template Predicted Secondary structure					.	.									.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		317	.	.			320	.	.	.	.	.	.	.										.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.				.	.	.	360	.	.
		207	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D