Job Description A1Y9I9 Confidence 43.38% Date Wed Jul 10 14:16:46 BST 2013 Rank 482 Aligned Residues 81 % Identity 16% Template c2rejA_ PDB info PDB header:choline-binding protein Chain: A: PDB Molecule:putative glycine betaine abc transporter protein; PDBTitle: abc-transporter choline binding protein in unliganded semi-2 closed conformation Resolution 2.60 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	L	R	D	L	Q	L
Query Conservation
Alig confidence																	.	.	.																		.	.	.	.						.
Template Conservation																	.	.	.																		.	.	.	.						.
Template Sequence		T	T	A	T	A	T	T	I	L	E	A	L	G	Y	E	.	.	.	T	D	V	K	V	L	S	V	P	V	T	Y	T	S	L	K	N	.	.	.	.	K	D	I	D	V	.	F	L	G	N	W	M	P	T	M	E	A	D	I	A	P
Template Known Secondary structure													T	T			.	.	.												T	S	S	T	T	T	.	.	.	.	T					.							S	T	T
Template Predicted Secondary structure																	.	.	.																		.	.	.	.						.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	H	A	L	L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	E	D	K	S	V	E	T	V	R	E	N	L	A	G	A	K	Y	T	L	A	T	N	A	K	G	A	E
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D