Job Description A1Y9I9 Confidence 99.37% Date Wed Jul 10 14:16:46 BST 2013 Rank 70 Aligned Residues 104 % Identity 15% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	.	.	A	G	F	D	E
Query Conservation																																																							.	.
Alig confidence																												.																											.	.
Template Conservation																												.
Template Sequence		M	T	V	S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	.	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D
Template Known Secondary structure					S	S	S										T	T									T	.		T	T									S																	G	G	G	G	S
Template Predicted Secondary structure																												.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A
Query Conservation
Alig confidence																		.	.	.	.	.												.	.	.	.	.												.	.
Template Conservation																		.	.	.	.	.												.	.	.	.	.												.	.
Template Sequence		K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	.	.	.	.	.	V	T	N	T	Y	D	V	I	I	V	D	.	.	.	.	.	S	S	N	F	Y	E	K	I	Y	N	A	.	.	L	K	P	N	G	Y	C	V	A
Template Known Secondary structure		T	T						S							T	T	.	.	.	.	.			S									.	.	.	.	.												.	.
Template Predicted Secondary structure																		.	.	.	.	.												.	.	.	.	.												.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D