Job Description A1Y9I9 Confidence 97.64% Date Wed Jul 10 14:16:46 BST 2013 Rank 307 Aligned Residues 131 % Identity 18% Template c2plwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna methyltransferase, putative; PDBTitle: crystal structure of a ribosomal rna methyltransferase, putative, from2 plasmodium falciparum (pf13_0052). Resolution 1.70 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	.	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L
Query Conservation																												.
Alig confidence																												.												.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		K	K	N	K	I	I	L	D	I	G	C	Y	P	G	S	W	C	Q	V	I	L	E	R	T	K	N	Y	K	N	K	I	I	G	I	D	K	K	I	.	.	.	.	.	.	.	.	.	.	.	.	M	D	P	I	P	N	.	V	Y	F
Template Known Secondary structure			T	T							S		T	T											T	T	T	S									S	S		.	.	.	.	.	.	.	.	.	.	.	.					T	T	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.													.	60	.	.	.	.		.	.	.
		156	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.															.	.	.	.	.	190	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	G	S	S	E	E	V	.	.	.	.	.	.	.	.	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	Y	Y	L	R	D	L	Q
Query Conservation										.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	G	E	I	G	K	D	N	M	N	N	I	N	S	V	D	Y	K	L	K	E	I	L	Q	D	K	K	I	D	I	I	L	S	D	A	A	V	P	C	I	G	N	K	I	D	D	H	L	N	S	C	E	L	T	L	S	I	T	H
Template Known Secondary structure						T	T	T	T	S	S															T	T																S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C	G	R	Y	R	C	R	L	H	H	T	S	L	P	D	F
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		F	M	E	Q	Y	.	.	I	N	I	G	G	T	Y	I	V	K	M	Y	L	G	S	Q	T	N	N	L	K	T	Y	L	K	G	M	F	Q	L	V	H	T	T	K	P	K	S	R	E	I	Y
Template Known Secondary structure							.	.														S	T	T										T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		139	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D