Job Description A1Y9I9 Confidence 99.22% Date Wed Jul 10 14:16:46 BST 2013 Rank 119 Aligned Residues 132 % Identity 17% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	G	Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		D	V	G	S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	.	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L
Template Known Secondary structure												S		T	T			S	B			B	T	T		T	T	S											.	T	T		B						S	B
Template Predicted Secondary structure																																							.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.
Predicted Secondary structure																																						.	.	.	.	.																	.
Query SS confidence																																						.	.	.	.	.																	.
Query Sequence		R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	.	.	.	.	.	L	L	A	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	.	E	A
Query Conservation																																						.	.	.	.	.																	.
Alig confidence								.	.	.												.	.	.	.	.	.	.	.									.	.	.	.	.																	.
Template Conservation								.	.	.												.	.	.	.	.	.	.	.
Template Sequence		A	A	N	G	V	E	.	.	.	G	E	V	F	A	S	N	V	F	S	E	.	.	.	.	.	.	.	.	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A
Template Known Secondary structure				T	T			.	.	.							S	T	T	T	T	.	.	.	.	.	.	.	.			S													S	S	S
Template Predicted Secondary structure								.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.									.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		H	A	L	L	P	H	G	A	.	T	V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H
Template Known Secondary structure		G	G	G													T	T	S	S										S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D