Job Description A1Y9I9 Confidence 68.98% Date Wed Jul 10 14:16:46 BST 2013 Rank 409 Aligned Residues 144 % Identity 19% Template c2nloA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum Resolution 1.64 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	M	E	E	G	L	P	N	A	K	L	D	S	V	V	Q	V	G	A	G	G	V	G	N	A	V	A	Y	A	L	V	T	H	G	V	Q	K	L	Q	V	A	D	L	D	T	S	R	A	Q	A	L	A	D	V	I	N	N	A	V
Template Known Secondary structure									T	T				S								S	T	T											T	T		S							S	S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		G	R	E	A	V	V	G	V	D	A	R	G	I	E	D	V	I	A	A	.	.	.	.	.	.	.	.	.	A	D	G	V	V	N	A	T	P	M	G	M	P	A	H	P	G	T	A	F	D	V	S	.	.	C	L	T	K	D	H	W
Template Known Secondary structure		T	S								S	T	T								.	.	.	.	.	.	.	.	.	S	S						S	S	T	T	S	T	T	S		S		S	S		G	G	.	.	G			T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C	G	R	Y	R	C	R	L	H	H	T	S	L	P	D	F	P	A	I	K	D	G	I	A	Q	L	T	Y	T	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	D	V	V	Y	M	P	I	E	T	E	L	L	K	A	A	R	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	T	L	D	G	T	R	M	A	I	H	Q	A
Template Known Secondary structure					S			S	S	S	S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.															.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D