 |
| Job Description | A1Y9I9 | | Confidence | 99.10% | Date | Wed Jul 10 14:16:46 BST 2013 |
| Rank | 145 | Aligned Residues | 104 |
| % Identity | 15% | Template | c2ipxA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:rrna 2'-o-methyltransferase fibrillarin; |
PDBTitle: human fibrillarin
|
| Resolution | 1.82 Å |
|
 |
|   |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | A | P | A | C | V | L | E | L | G | T | Y | C | G | Y | S | T | L | L | I | A | R | A | L | P | P | G | S | R | L | L | T | V | E | R | D | S | R | T | A | A | V | A | E | K | V | I | R | L | A | G | F | D | E | Q | M | V | E | L | I |
| Query Conservation |   |
  |   |
|
|   |
|
|
|
|
|
|   |   |
|
|
|
|
|   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |
|
|
|   |
|   |   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
| . | . | . | . |
|   |   |
|
| Template Sequence |   |
K | P | G | A | K | V | L | Y | L | G | A | A | S | G | T | T | V | S | H | V | S | D | I | V | G | P | D | G | L | V | Y | A | V | E | F | S | H | R | S | G | R | D | L | I | N | L | A | K | K | R | T | N | . |
. |
. |
. |
I | I | P | V |
| Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | . | . | . | . |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
|
. | . | . | . |
|   |
|   |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . |
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | G | S | S | E | E | V | I | P | R | L | R | A | Q | H | Q | L | N | R | A | D | L | V | L | L | A | . |
H | R | P | R | Y | Y | L | R | D | L | Q | L | L | E | A | H | A | L | L | P | H | G | A | T | V | L | A |
| Query Conservation |   |
  |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
| . |
|   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |
| . | . | . |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |
|
|
|
|
|   |
|
|
|
| Template Sequence |   |
I | E | D | A | R | H | P | . |
. |
. |
H | K | Y | R | X | L | I | A | X | V | D | V | I | F | A | D | V | A | Q | P | D | Q | T | R | I | V | A | L | N | A | H | T | F | . |
. |
L | R | N | G | G | H | F | V | I |
| Template Known Secondary structure |   |
| S |
| T | T |
| G | . | . | . | G | G | G | G | G | G |
|
|
|  |  |  |  |  |  |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
215 | . | . | . | . | 220 | . | |
|
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
|
. | . | . | . | . | 260 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|