Job Description A1Y9I9 Confidence 98.69% Date Wed Jul 10 14:16:46 BST 2013 Rank 219 Aligned Residues 123 % Identity 18% Template c2frxD_ PDB info PDB header:transferase Chain: D: PDB Molecule:hypothetical protein yebu; PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli Resolution 2.90 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		L	S	H	M	G	P	V	K	G	Q	I	L	M	R	L	V	.	.	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		L	F	Y	I	Q	E	A	S	S	X	L	P	V	A	A	L	F	A	D	G	N	A	P	Q	R	V	X	D	V	A	A	A	P	G	S	K	T	T	Q	I	S	A	R	X	N	N	E	G	A	I	L	A	N	E	F	S	A	S	R	V
Template Known Secondary structure		S																	T	T	T				S					S	S		T	T	S										T	T	T		S							S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																		.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																		.	.	.	.	.
Template Sequence		K	V	L	H	A	N	I	S	R	C	G	I	S	N	.	.	V	A	L	T	H	F	D	G	R	V	F	G	A	A	V	P	E	.	.	.	.	.	X	F	D	A	I	L	L	D	A	P	C	S	G	E	G	V	V	R	K	D	P	D
Template Known Secondary structure												T			S	.	.								S	T	T					S	T	T	.	.	.	.	.														G	G	G	G	G	T		T	T
Template Predicted Secondary structure																.	.																		.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
						184	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.											.	.	.	.	.	.
Query SS confidence		.	.	.	.											.	.	.	.	.	.
Query Sequence		.	.	.	.	R	P	R	Y	Y	L	R	D	L	Q	.	.	.	.	.	.	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L
Query Conservation		.	.	.	.											.	.	.	.	.	.
Alig confidence		.	.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	N	W	S	P	E	S	N	Q	E	I	A	A	T	Q	R	E	L	I	D	S	A	F	H	A	L	R	P	G	G	T	L	V
Template Known Secondary structure		S	S	S	S																							T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D