Job Description A1Y9I9 Confidence 87.78% Date Wed Jul 10 14:16:46 BST 2013 Rank 340 Aligned Residues 76 % Identity 29% Template c1ys7B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+ Resolution 1.58 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R
Query Conservation
Alig confidence																											.	.	.			.															.	.	.	.
Template Conservation																											.	.	.			.															.	.	.	.
Template Sequence		R	V	L	V	V	D	D	D	S	D	V	L	A	S	L	E	R	G	L	R	L	S	G	F	E	.	.	.	V	A	.	T	A	V	D	G	A	E	A	L	R	S	A	T	E	.	.	.	.	N	R	P	D	A	I	V	L	D	I	N
Template Known Secondary structure								S															T	T			.	.	.			.			S	S											.	.	.	.	S			S						S	S
Template Predicted Secondary structure																											.	.	.			.															.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	Y	Y	L	R	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T	V	L	A
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		M	P	V	.	L	D	G	V	S	V	V	T	A	L	R	A	M	D	N	D	V	P	V	C	V
Template Known Secondary structure			S	S	.	S												T	T
Template Predicted Secondary structure					.
Template SS confidence
		61	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D