Job Description A1Y9I9 Confidence 64.12% Date Wed Jul 10 14:16:46 BST 2013 Rank 426 Aligned Residues 143 % Identity 19% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	M	R	L	V	E	E	K	A	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V	A	E	K	V	I	R	L	A	G
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		M	A	L	E	E	E	I	G	R	V	K	D	K	N	I	V	I	Y	G	A	.	.	G	G	A	A	R	A	V	A	F	E	L	A	K	D	N	N	I	I	I	A	N	R	T	V	E	K	A	E	A	L	A	K	E	I	A	E	K	L
Template Known Secondary structure													S									.	.	S											T	S	S	S							S	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		F	D	E	Q	M	V	E	L	I	A	G	S	S	E	E	V	I	P	R	L	R	A	Q	H	Q	L	N	R	A	D	L	V	L	L	A	H	R	P	R	Y	Y	L	R	.	D	L	Q	L	L	E	A	H	A	L	L	P	H	G	A	T
Query Conservation																																													.
Alig confidence						.												.	.	.	.	.	.	.	.																				.
Template Conservation						.												.	.	.	.	.	.	.	.
Template Sequence		N	K	K	F	.	G	E	E	V	K	F	S	G	L	D	V	.	.	.	.	.	.	.	.	D	L	D	G	V	D	I	I	I	N	A	T	P	I	G	M	Y	P	N	I	D	V	E	P	I	V	K	A	E	K	L	R	E	D	M	V
Template Known Secondary structure		T				.									T	T		.	.	.	.	.	.	.	.			T	T								S		T	T		T	T			S	S			S	S		S	T	T			S	S	S
Template Predicted Secondary structure						.												.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.		.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	D	H	V	L	F	P	G	A	P	R	F	L	Q	Y	T	K	S	C	G	R	Y	R	C	R	L	H	H	T	S	L	P	D	F	P	A	I	K	D	G	I	A	Q	L	T	Y	T	G
Query Conservation
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	M	D	L	I	Y	N	P	L	E	T	V	L	L	K	E	A	K	K	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	T	I	N	G	L	G	M	L	I	Y	Q	G
Template Known Secondary structure		.							S	S	S	S									T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.															.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D