Job Description A1Y9I9 Confidence 96.77% Date Wed Jul 10 14:16:46 BST 2013 Rank 316 Aligned Residues 67 % Identity 10% Template c1i4wA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mitochondrial replication protein mtf1; PDBTitle: the crystal structure of the transcription factor sc-mttfb2 offers intriguing insights into mitochondrial transcription Resolution 2.60 Å

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		88	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	L	M	R	L	V	E	E	K	A	.	.	.	.	.	.	.	.	.	P	A	C	V	L	E	L	G	T	Y	C	G	Y	S	T	L	L	I	A	R	A	L	P	P	G	S	R	L	L	T	V	E	R	D	S	R	T	A	A	V
Query Conservation													.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																									.
Template Conservation																																														.
Template Sequence		T	V	Y	N	K	I	F	D	K	L	D	L	T	K	T	Y	K	H	P	E	E	L	K	V	L	D	L	Y	P	G	V	G	I	Q	S	A	I	F	Y	N	K	Y	C	P	.	R	Q	Y	S	L	L	E	K	R	S	S	L	Y	K	F
Template Known Secondary structure													G	G	G	T				T	T	T							S		T	T														.	S
Template Predicted Secondary structure																																														.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	V	I	R	L	A	G	F	D	E	Q	M	V	E	L	I	A	G	S	S
Query Conservation
Alig confidence								.	.	.	.				.
Template Conservation								.	.	.	.				.
Template Sequence		L	N	A	K	F	E	.	.	.	.	G	S	P	.	L	Q	I	L	K	R	D	P
Template Known Secondary structure						T	T	.	.	.	.	T	S	S	.						S		T
Template Predicted Secondary structure								.	.	.	.				.
Template SS confidence
		86	.	.	.	90	.					.	.	.		.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D