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Job Description | A2A5K6 | Confidence | 97.95% | Date | Tue Jul 30 13:04:49 BST 2013 |
Rank | 139 | Aligned Residues | 104 |
% Identity | 11% | Template | c3hcsA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:tnf receptor-associated factor 6; |
PDBTitle: crystal structure of the n-terminal domain of traf6
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Resolution | 2.20 Å |
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1018 | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | F | S | C | K | V | C | S | E | A | F | P | S | R | A | E | M | E | S | H | K | R | A | H | A | G | P | A | A | F | K | C | P | D | C | P | F | S | A | R | Q | W | P | E | V | R | A | H | M | A | Q | H | S | S | L | R | P | H | Q | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | H | K | C | P | V | D | N | E | I | L | L | E | N | Q | L | F | P | D | N | F | A | K | R | E | I | L | S | L | M | V | K | C | P | N | E | G | C | L | H | K | M | E | L | R | H | L | E | D | H | Q | A | H | C | E | F | A | L | M | D |
Template Known Secondary structure |   |
| S | B |
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| T | T | S |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
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1078 | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | Q | C | S | F | A | S | K | N | K | K | D | L | R | R | H | M | L | T | H | T | N | E | K | P | F | S | C | H | V | C | G | Q | R | F | N | R | N | G | H | L | K | F | H | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
C | P | Q | C | Q | R | P | F | Q | K | F | H | I | N | I | H | I | L | K | D | C | P | R | R | Q | V | S | C | D | N | C | A | A | S | M | A | . |
F | E | D | K | E | I | H | D |
Template Known Secondary structure |   |
| T | T | T |
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|  |  |  | G | G | G |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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