Job Description A2A5K6 Confidence 99.74% Date Tue Jul 30 13:04:49 BST 2013
Rank 35 Aligned Residues 93
% Identity 18% Template c2ej4A_
PDB info
PDB header: gene regulationChain: A: PDB Molecule: zinc finger protein zic 3;
PDBTitle: functional and structural basis of nuclear localization2 signal in zic3 zinc finger domain: a role of conserved3 tryptophan residue in the zinc finger domain
Resolution UNK
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
994 . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . .
1040 . . . . . . . . . 1050 . .
Predicted Secondary structure  
.
Query SS confidence  
.
Query Sequence  
P A A S H T L G L V V P Q S P P S A A A S S T K K F S C K V C S E A F P S R A E M E S H K R .
A H A G P A A F K C P D C
Query Conservation  
                                                                                  .                    
Alig confidence  
.
Template Conservation  
                                                                                             
Template Sequence  
G S S G S S G Q P I K Q E L S C K W I D E A Q L S R P K K S C D R T F S T M H E L V T H V T M E H V G G P E Q N N H V C
Template Known Secondary structure  
S S S S S S S S T T T T T S
Template Predicted Secondary structure  
Template SS confidence  
   
1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60
 
   
1053 . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
P F S A R Q W P E V R A H M A Q H S S L R P H Q C N Q C S F A S K N K K D L R R H M L T H T N E K P F S C H
Query Conservation  
                                                                                       
Alig confidence  
. . . . . . . . . . . . . . . . . . . .
Template Conservation  
. . . . . . . . . . . . . . . . . . . .                                    
Template Sequence  
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
Y W E E C P R E G K S F K A K Y K L V N H I R V H T G E K S G P S S
Template Known Secondary structure  
. . . . . . . . . . . . . . . . . . . . T T S S T T S S T S S
Template Predicted Secondary structure  
. . . . . . . . . . . . . . . . . . . .
Template SS confidence  
   
61 . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
 
Phyre2 is part of Genome3D