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Job DescriptionA2A5K6
Confidence99.60%DateTue Jul 30 13:04:49 BST 2013
Rank54Aligned Residues105
% Identity23%Templatec1ubdC_
PDB info PDB header:transcription/dnaChain: C: PDB Molecule:protein (yy1 zinc finger domain); PDBTitle: co-crystal structure of human yy1 zinc finger domain bound2 to the adeno-associated virus p5 initiator element
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1021........1030.........1040.........1050.........1060.........1070.........
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Query Sequence  CKVCSEAFPSRAEMESHKRAHAGPAAFKCPDCPFSARQWPEVRAHMAQHSSLRPHQCNQ.
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Template Sequence  HKGCTKMFRDNSAMRKHLHTHG. PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFE
Template Known Secondary structure  STT


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   300.........310.........320. ........330.........340.........350........
 
   1080.........1090.........1100.........1110.........1120.......
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Query Sequence  . . . CSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLHS
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Template Sequence  GCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI. LTHA
Template Known Secondary structure  T


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STT




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   359360.........370.........380.........390.........400.... ....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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