Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5K6
Confidence25.82%DateTue Jul 30 13:04:49 BST 2013
Rank389Aligned Residues50
% Identity22%Templatec3lrqB_
PDB info PDB header:ligaseChain: B: PDB Molecule:e3 ubiquitin-protein ligase trim37; PDBTitle: crystal structure of the u-box domain of human ubiquitin-2 protein ligase (e3), northeast structural genomics3 consortium target hr4604d.
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1047..1050.........1060.........1070.........1080.........1090.........1100......
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  FKCPDCPFSARQWPEVRAHMAQHSSLRPHQCNQCSFASKNKKDLRRHMLTHTNEKPFSCH
Query Conservation    
  
         
  
   
       
  
   
     
  
   
       
 
Alig confidence 











...............










.













....


Template Conservation    
 

      ...............      


 
.
  

         .... 

Template Sequence  FRCFICXEKLRD. . . . . . . . . . . . . . . ARLCPHCSKLC. CFSCIRRWLTEQRA. . . . QCP
Template Known Secondary structure  TB
TTT
SB
SS...............
TTT

.T
S....B
T
Template Predicted Secondary structure 










...............




.


....


Template SS confidence 



























































   13......20.... .....30..... ....40......... 50..
 
   1107..1110......
Predicted Secondary structure 







Query SS confidence 









Query Sequence  VCGQRFNRNG
Query Conservation   
   
    
Alig confidence 









Template Conservation   

       
Template Sequence  HCRAPLQLRE
Template Known Secondary structure  TT

B

GGG
Template Predicted Secondary structure 






Template SS confidence 









   53......60..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D