 |
Job Description | A2A5K6 | Confidence | 22.67% | Date | Tue Jul 30 13:04:49 BST 2013 |
Rank | 401 | Aligned Residues | 69 |
% Identity | 17% | Template | d1v87a_ |
SCOP info | RING/U-box
| RING/U-box
| RING finger domain, C3HC4
|
Resolution | UNK |
|
 |
  |   |
467 | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | C | R | I | C | G | S | R | F | L | S | H | E | D | L | R | F | H | V | N | S | H | E | A | G | D | P | Q | L | F | R | C | L | Q | C | S | Y | R | S | R | R | W | S | S | L | K | E | H | M | F | N | H | V | G | S | K | P | Y | K | C |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
| . |
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | C | I | I | C | M | E | K | L | A | V | A | S | G | Y | S | D | M | T | D | S | K | A | L | G | P | M | V | V | G | R | L | T | K | C | S | H | A | F | . |
H | L | L | C | L | L | A | M | Y | C | N | G | N | K | D | G | S | L | Q | C |
Template Known Secondary structure |   |
 |  | T | T | T | T |  |  | T | T | S |
|
| S | T | T | T | T |
|
|
| S | S | S |
| S | S |
|
|  |  |  | S | S | S |
|
|  |  | . |
|  |  |  |  |  |  |  |  |  |  | T |
|
| S | S |
|
| B |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
527 | . | . | 530 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | C | S | Y | T | S | V | Y | R |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |   |
|
Template Sequence |   |
P | S | C | K | T | I | Y | G | E | K |
Template Known Secondary structure |   |
T | T | T |
|
| B | S | S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|