Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5K6
Confidence77.48%DateTue Jul 30 13:04:49 BST 2013
Rank281Aligned Residues47
% Identity17%Templatec2kreA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:ubiquitin conjugation factor e4 b; PDBTitle: solution structure of e4b/ufd2a u-box domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1047..1050.........1060.........1070.........1080.........1090.........1100......
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  FKCPDCPFSARQWPEVRAHMAQHSSLRPHQCNQCSFASKNKKDLRRHMLTHTNEKPFSCH
Query Conservation    
  
         
  
   
       
  
   
     
  
   
       
 
Alig confidence 











...............




.





.











.....


Template Conservation    


   

 
...............

  
. 
 
  .
  
   
    ..... 

Template Sequence  FRDPLMDTLMTD. . . . . . . . . . . . . . . PVRLP. SGTIMD. RSIILRHLLNSP. . . . . TDP
Template Known Secondary structure  TB
TTT
SB
SS...............T.TT.TTS
S.....B
S
Template Predicted Secondary structure 




...............

.



.

.....


Template SS confidence 



























































   1232.......1240... ..... .1250.... .....1260...... ...
 
   1107..1110.....
Predicted Secondary structure 







Query SS confidence 








Query Sequence  VCGQRFNRN
Query Conservation   
   
   
Alig confidence 








Template Conservation   
  

   
Template Sequence  FNRQTLTES
Template Known Secondary structure  SS

B

TT
Template Predicted Secondary structure 








Template SS confidence 








   1270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D