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Job Description | A2A5K6 | Confidence | 99.60% | Date | Tue Jul 30 13:04:49 BST 2013 |
Rank | 54 | Aligned Residues | 105 |
% Identity | 23% | Template | c1ubdC_ |
PDB info |
PDB header:transcription/dna | Chain: C: PDB Molecule:protein (yy1 zinc finger domain); |
PDBTitle: co-crystal structure of human yy1 zinc finger domain bound2 to the adeno-associated virus p5 initiator element
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Resolution | 2.50 Å |
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1021 | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | K | V | C | S | E | A | F | P | S | R | A | E | M | E | S | H | K | R | A | H | A | G | P | A | A | F | K | C | P | D | C | P | F | S | A | R | Q | W | P | E | V | R | A | H | M | A | Q | H | S | S | L | R | P | H | Q | C | N | Q | . |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | K | G | C | T | K | M | F | R | D | N | S | A | M | R | K | H | L | H | T | H | G | . |
P | R | V | H | V | C | A | E | C | G | K | A | F | V | E | S | S | K | L | K | R | H | Q | L | V | H | T | G | E | K | P | F | Q | C | T | F | E |
Template Known Secondary structure |   |
S | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
. | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . |
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1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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C | S | F | A | S | K | N | K | K | D | L | R | R | H | M | L | T | H | T | N | E | K | P | F | S | C | H | V | C | G | Q | R | F | N | R | N | G | H | L | K | F | H | I | Q | R | L | H | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | C | G | K | R | F | S | L | D | F | N | L | R | T | H | V | R | I | H | T | G | D | R | P | Y | V | C | P | F | D | G | C | N | K | K | F | A | Q | S | T | N | L | K | S | H | I | . |
L | T | H | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
359 | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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