Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5K6
Confidence20.19%DateTue Jul 30 13:04:49 BST 2013
Rank416Aligned Residues79
% Identity19%Templatec1i3qI_
PDB info PDB header:transcriptionChain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540.........550........ .560.........570......
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Query Sequence  YKCDECSYTSVYRKDVIRHAAVHSQDRKKRPDPTP. . . . . . . KLSSFPCPVCGRVYPMQK
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Template Sequence  FECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFF
Template Known Secondary structure  SSS


S
S





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S

TTGGG
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TTT

S
B

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   27..30.........40.........50.........60.........70.........80......
 
   577..580.........590.........600..
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Query Sequence  RLTQHMKTHSTEKPHMCDKCGKSFKK
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Template Sequence  QSQQRRKDTSMVLFFVCLSCSHIFTS
Template Known Secondary structure 
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SS



BTTT


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   87..90.........100.........110..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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