Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5K6
Confidence83.72%DateTue Jul 30 13:04:49 BST 2013
Rank248Aligned Residues31
% Identity23%Templatec3jyw9_
PDB info PDB header:ribosomeChain: 9: PDB Molecule:60s ribosomal protein l43; PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
Resolution8.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1045....1050.........1060.........1070.........1080.....
Predicted Secondary structure 



























Query SS confidence 








































Query Sequence  AAFKCPDCPFSARQWPEVRAHMAQHSSLRPHQCNQCSFASK
Query Conservation      
  
         
  
   
       
  
   
 
Alig confidence 
















..........













Template Conservation    
 

 


  


  .......... 


 
 


   
Template Sequence  ARYDCSFCGKKTVKRGA. . . . . . . . . . AGIWTCSCCKKTVA
Template Known Secondary structure  S
B

SS

SS
BSB
S..........SS
B

SSS




Template Predicted Secondary structure 










..........




Template SS confidence 








































   35....40.........50. ........60.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D