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Job DescriptionA2A5K6
Confidence99.94%DateTue Jul 30 13:04:49 BST 2013
Rank2Aligned Residues111
% Identity17%Templatec1tf6D_
PDB info PDB header:transcription/dnaChain: D: PDB Molecule:protein (transcription factor iiia); PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region
Resolution3.10 Å
Model Dimensions (Å)X:82.210 Y:79.406 Z:44.333

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1016...1020... ......1030.........1040.........1050.........1060.........1070.
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Query Sequence  TKKFSCKV. . CSEAFPSRAEMESHKRAHAGPAAFKCPDCPFSARQWPEVRAHMAQHSS. .
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Template Sequence  YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG
Template Known Secondary structure  SS

B
SSTTT

B
SST

SS

SSTT




SSTTTTTTTTT
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   10.........20.........30.........40.........50.........60.........
 
  
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Template Sequence  EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH
Template Known Secondary structure 




SSS


S
TTSSTTT

B

TTSSS


BSSTT
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   70.........80.........90.........100.........110.........120.........
 
   1072.......1080.........1090.........1100.........1110.........1120......
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Query Sequence  . . . . LRPHQCNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKFHIQRLH
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Template Conservation           
  
 
       
  
   
   
   
  
   
     
  
    
Template Sequence  TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH
Template Known Secondary structure  SSS
SSB

SSS


B
SSTSS
S



STTT




S
TT

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   130.........140.........150.........160.........170.........180........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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