Phyre 2 alignment of Q8NBR0 with c2w2sA_

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Job Description | Q8NBR0
Confidence | 3.35% | Date | Wed Jun 6 09:32:45 BST 2012
Rank | 57 | Aligned Residues | 23
% Identity | 30% | Template | c2w2sA_
PDB info | PDB header:viral protein | Chain: A: PDB Molecule:matrix protein; | PDBTitle: structure of the lagos bat virus matrix protein
Resolution | 2.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | L | L | G | P | S | E | V | M | A | G | P | A | E | E | A | G | A | H | C | P | E | S | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | L | I | G | V | V | K | V | V | I | G | . | L | V | L | S | A | S | P | V | P | E | G | M
Template Known Secondary structure |  | G | G |  |  |  |  |  |  |  |  |  | . |  |  |  | T | S |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 88 | . | 90 | . | . | . | . | . | . | . | . |  | . | 100 | . | . | . | . | . | . | . | . | . | 110

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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