Phyre 2 alignment of Q8NBR0 with c2rmsB_

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Job Description | Q8NBR0
Confidence | 3.00% | Date | Wed Jun 6 09:32:45 BST 2012
Rank | 68 | Aligned Residues | 23
% Identity | 30% | Template | c2rmsB_
PDB info | PDB header:transcription | Chain: B: PDB Molecule:msin3a-binding protein; | PDBTitle: solution structure of the msin3a pah1-sap25 sid complex
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | G | S | P | G | G | C | V | C | S | S | Q | A | S | P | A | P | R | A | A | A | P | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | M | S | Q | G | E | Q | T | P | N | C | V | A | S | S | L | P | S | T | S | C | P | D
Template Known Secondary structure |  |  |  | T | T | T | T | S | S | S | S | S |  |  |  | T | T | T | S | S | S |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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