Phyre 2 alignment of Q8NBR0 with d1r4wa_

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Job Description | Q8NBR0
Confidence | 2.69% | Date | Wed Jun 6 09:32:45 BST 2012
Rank | 83 | Aligned Residues | 26
% Identity | 35% | Template | d1r4wa_
SCOP info | Thioredoxin fold | Thioredoxin-like | DsbA-like
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 343 | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | Y | W | G | P | T | A | D | S | Q | D | T | V | A | A | V | L | K | R | R | L | L | Q | P | S | R | R | V | K | R | S | R | R | R | P | L | L | P | P | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
Template Conservation |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
Template Sequence |  | M | L | F | G | . | . | S | D | R | M | E | L | L | A | Y | L | L | G | E | K | W | M | G | P | . | . | . | . | . | . | . | . | . | . | . | . | V | P | P | T
Template Known Secondary structure |  |  |  |  | S | . | . | T | T |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . | . | . | . | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 196 | . | . | . |  |  | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | 220 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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