Phyre 2 alignment of Q8NBR0 with c1aq8B_

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Job Description | Q8NBR0
Confidence | 2.58% | Date | Wed Jun 6 09:32:45 BST 2012
Rank | 90 | Aligned Residues | 33
% Identity | 12% | Template | c1aq8B_
PDB info | PDB header:oxidoreductase | Chain: B: PDB Molecule:nitrite reductase; | PDBTitle: structure of alcaligenes faecalis nitrite reductase reduced2 with ascorbate
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 |  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | S | P | R | V | T | Y | T | R | V | S | P | G | . | Q | A | E | D | V | T | F | L | Y | H | P | C | A | H | P | W | L | K | L | Q | L | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | N | P | G | E | K | T | I | L | R | F | K | A | T | K | P | G | . | . | V | F | V | Y | H | C | A | P | P | G | M | V | P | W | H | V | V
Template Known Secondary structure |  | B |  | T | T |  |  |  |  |  |  |  |  |  |  | S |  |  | . | . |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |  |  | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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