Phyre 2 alignment of Q8NBR0 with c3c65A_

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Job Description | Q8NBR0
Confidence | 15.48% | Date | Wed Jun 6 09:32:45 BST 2012
Rank | 17 | Aligned Residues | 26
% Identity | 19% | Template | c3c65A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:uvrabc system protein c; | PDBTitle: crystal structure of bacillus stearothermophilus uvrc 5'2 endonuclease domain
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 334 | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | H | R | N | F | R | R | G | E | S | I | Y | W | G | P | T | A | D | S | Q | D | T | V | A | A | V | L | K | R | R | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | R | K | Y | K | V | K | T | V | . | . | . | . | A | G | P | N | D | Y | E | T | X | R | E | V | V | R | R | R | Y
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 411 | . | . | . | . | . | . | . | . |  |  |  |  | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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