Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence87.55%DateFri May 25 09:45:29 BST 2012
Rank265Aligned Residues109
% Identity21%Templatec2vifA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.... .....130.....
Predicted Secondary structure 






















































...










Query SS confidence 

































































. . .










Query Sequence  PWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVK. . . FNSLNELVDYH
Query Conservation                                                
                   ...           
Alig confidence 


















.













































...










Template Conservation   

 
 


  

 

   .  
 



 
        


     
 
  
                 
 

  

  
Template Sequence  GWYWGPITRWEAEGKLANV. PDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHS
Template Known Secondary structure  T
B

S

TTTS.
TT

SSTT
STTTTTT

S


BSS
Template Predicted Secondary structure 










.





















Template SS confidence 















































































   383......390.........400. ........410.........420.........430.........440.........450.........460.
 
   136...140.........150.........160. .......
Predicted Secondary structure 

























.

Query SS confidence 

























.






Query Sequence  RSTSVSRNQQIFLRDIEQVPQQPTYV. QALFDFD
Query Conservation                            . 
 
 
 
Alig confidence 

























.






Template Conservation     
                  
  
  



  
Template Sequence  IGDSENGAFCYSRSRLPGSATYPVRLTNPVSRFM
Template Known Secondary structure  T


S

STT







B

SS
Template Predicted Secondary structure 
























Template SS confidence 

































   462.......470.........480.........490.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions