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Job DescriptionP62993
Confidence90.48%DateFri May 25 09:45:29 BST 2012
Rank256Aligned Residues116
% Identity24%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  EMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVD
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Template Sequence  DLSVHLWYAGPMERAGAESILA. NRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVE
Template Known Secondary structure 
GGGSSSB

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   22.......30.........40... ......50.........60.........70.........80.........90.........100
 
   134.....140.........150.........160.........170.
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Query Sequence  YHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQE
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Template Sequence  FYQQNSLKDCFKSLDTTLQFPFKEP. EKRTISRSGPSS
Template Known Secondary structure  TTS
GGGT
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   101........110.........120..... ....130.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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