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Job Description | P62993 | Confidence | 27.50% | Date | Fri May 25 09:45:29 BST 2012 |
Rank | 318 | Aligned Residues | 116 |
% Identity | 17% | Template | c2xp1A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:spt6; |
PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6
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Resolution | 2.20 Å |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | G | A | F | L | I | R | E | S | E | S | A | P | G | D | F | S | L | S | V | K | F | G | N | D | V | Q | H | F | K | V | L | R | D | G | A | G | K | Y | F | L | W | V | V | K | F | N | S | L | N | E | L | V | D | Y | H | R | S | T | S | V | S | R | N | Q | Q | I | F | L | R | D | I | E | Q | V | P | Q | Q | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | D | D | F | L | I | R | K | G | . |
S | R | H | G | Y | C | V | L | V | I | K | F | A | S | D | V | F | V | H | M | K | I | E | E | H | S | E | H | Y | T | C | S | N | K | H | F | E | D | I | D | E | V | I | S | V | Y | V | R | P | I | L | R | N | L | K | S | I | K | A | H | A | K | Y | F | N | S | P | E | D | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
811 | . | . | . | . | . | . | . | . | |
820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . |
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158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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P | T | Y | V | Q | A | L | F | D | F | D | P | Q | E | D | G | E | . |
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L | G | F | R | R | G | D | F | I | H | V | M | D | N | S | D | P | N | W | W | K | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | K | L | L | S | S | F | D | G | S | K | V | V | Y | A | F | Y | F | S | R | K | Y | P | G | K | L | T | F | A | Y | N | N | G | S | I | L | E | E | Y | I | G | V | S | D | M | L | T | Y | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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