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Job Description | P62993 | Confidence | 52.55% | Date | Fri May 25 09:45:29 BST 2012 |
Rank | 306 | Aligned Residues | 84 |
% Identity | 17% | Template | c3gxxB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcription elongation factor spt6; |
PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
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Resolution | 2.40 Å |
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51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | Y | I | E | M | K | P | H | P | W | F | F | G | K | I | P | R | A | K | A | E | E | M | L | S | K | Q | R | H | D | G | A | F | L | I | R | E | S | E | S | A | P | G | D | F | S | L | S | V | K | F | G | N | D | V | . |
Q | H | F | K | V | L | R | D | G | A | G | K | . |
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Y | F | L | W | V | V | K | F | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | H | X | H | R | V | I | N | H | P | Y | Y | F | P | F | N | G | K | Q | A | E | D | Y | L | . |
R | S | K | E | R | G | D | F | V | I | R | Q | S | S | R | G | D | D | H | L | A | I | T | W | K | L | D | K | D | L | F | Q | H | V | D | I | Q | E | X | E | K | E | X | G | K | V | L | V | V | E | G | Q | R | Y | H |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
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127 | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | L | N | E | L | V | D | Y | H |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | L | D | Q | I | I | V | E | Y |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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85 | . | . | . | . | 90 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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