 |
Job Description | P62993 | Confidence | 99.64% | Date | Fri May 25 09:45:29 BST 2012 |
Rank | 169 | Aligned Residues | 62 |
% Identity | 27% | Template | c2k2mA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:eps8-like protein 1; |
PDBTitle: structural basis of pxxdy motif recognition in sh3 binding
|
Resolution | UNK |
|
 |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | V | P | Q | Q | P | T | Y | V | Q | A | L | F | D | F | D | P | Q | E | D | G | E | L | G | F | R | R | G | D | F | I | H | V | M | D | N | S | D | P | N | W | W | K | G | A | C | H | G | Q | T | G | M | F | P | R | N | Y | V | T | P | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |
Template Sequence |   |
P | L | G | S | G | A | L | K | W | V | L | C | N | Y | D | F | Q | A | R | N | S | S | E | L | S | V | K | Q | R | D | V | L | E | V | L | D | D | S | R | K | W | W | K | V | R | D | P | A | G | Q | E | G | Y | V | P | Y | N | I | L | T | P | Y |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  | S | S |
| B |
|
|
| S | S | S | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |
| T | T | S |
|
|  |  |  |  | G | G | G |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
474 | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|