Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence99.67%DateFri May 25 09:45:29 BST 2012
Rank139Aligned Residues55
% Identity27%Templatec1yn8E_
PDB info PDB header:unknown functionChain: E: PDB Molecule:nap1-binding protein 2; PDBTitle: sh3 domain of yeast nbp2
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190........ .200.........210...
Predicted Secondary structure 

















..




Query SS confidence 







































. .














Query Sequence  TYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGAC. . HGQTGMFPRNYVTPV
Query Conservation      
 
 
 
    


   

 
 

 
   


 
  .. 
  
 





  
Alig confidence 







































..














Template Conservation      

  
      

    

 
 
       
           
 

 


  
Template Sequence  QRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYI
Template Known Secondary structure  SS
B


STTB

B
TT
TT
TTSS
GGG
Template Predicted Secondary structure 






















Template SS confidence 
























































   2.......10.........20.........30.........40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions