 |
Job Description | P62993 | Confidence | 99.69% | Date | Fri May 25 09:45:29 BST 2012 |
Rank | 120 | Aligned Residues | 55 |
% Identity | 33% | Template | c2js0A_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:cytoplasmic protein nck1; |
PDBTitle: solution structure of second sh3 domain of adaptor nck
|
Resolution | UNK |
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Q | A | L | F | D | F | D | P | Q | E | D | G | E | L | G | F | R | R | G | D | F | I | H | V | M | D | N | S | D | P | N | W | W | K | G | A | C | H | G | Q | T | G | M | F | P | R | N | Y | V | T | P | V | N | R |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |
|
Template Sequence |   |
A | Y | V | K | F | N | Y | M | A | E | R | E | D | E | L | S | L | I | K | G | T | K | V | I | V | M | E | K | C | S | D | G | W | W | R | G | S | Y | N | G | Q | V | G | W | F | P | S | N | Y | V | T | E | E | G | D |
Template Known Secondary structure |   |
 |  |  |
| S |
| B |
|
|
| S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |  |  | S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|