Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence84.91%DateFri May 25 09:45:29 BST 2012
Rank273Aligned Residues100
% Identity26%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 




































































Query SS confidence 















































































Query Sequence  EMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVD
Query Conservation                                                     
                            
Alig confidence 




















.

























































Template Conservation   
    

 
 


  

 

.     
 



 
        


       
  
        
     
 

  

 
Template Sequence  DLSVHLWYAGPMERAGAESIL. ANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVE
Template Known Secondary structure 
STTSSSS

.S
TTB

SSS
S
SSS
TTSSSSSSS
Template Predicted Secondary structure 











.

























Template SS confidence 















































































   665....670.........680..... ....690.........700.........710.........720.........730.........740...
 
   134.....140.........150....
Predicted Secondary structure 




















Query SS confidence 




















Query Sequence  YHRSTSVSRNQQIFLRDIEQV
Query Conservation                       
Alig confidence 




















Template Conservation   
           
   
  
Template Sequence  FYQQNSLKDCFKSLDTTLQFP
Template Known Secondary structure  TTS
SSS





B
Template Predicted Secondary structure 














Template SS confidence 




















   744.....750.........760....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions