Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence99.75%DateFri May 25 09:45:29 BST 2012
Rank40Aligned Residues58
% Identity40%Templatec2df6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200.........210...
Predicted Secondary structure 

























Query SS confidence 

























































Query Sequence  QQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPV
Query Conservation         
 
 
 
    


   

 
 

 
   


 
   
  
 





  
Alig confidence 

























































Template Conservation 
    
 

 

      


   

 
 

      
      
  
 

  


 
Template Sequence  PLGSVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI
Template Known Secondary structure 
TT
SS
B

SSTTB

B
TT

SSSTTGGG
Template Predicted Secondary structure 
























Template SS confidence 

























































   6...10.........20.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions