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Job DescriptionP62993
Confidence99.79%DateFri May 25 09:45:29 BST 2012
Rank23Aligned Residues148
% Identity35%Templatec1x27F_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50........ .60.........70... ..
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Query Sequence  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAEL. . NGKDGFIPKNYIEMKPH. . . . PWFFGKIPRAKAEEM. LS
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Template Sequence  VIALHSYEPSHDGDLGFEKGEQLRILEQ. . SGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLA
Template Known Secondary structure  SS
B


STTB

B
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..BTTSSS

GGG
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STTSTTB
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TS
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   66...70.........80.........90... ......100.........110.........120.........130.........140...
 
   76...80.........90.........100.........110... ......120.........130.........140.........
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Query Sequence  KQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRD. . . . . . GAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLR
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Template Sequence  PGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRP
Template Known Secondary structure  SS

TT
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   150..
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Query Sequence  DIE
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Template Sequence  CQT
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   224..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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