Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence99.85%DateFri May 25 09:45:29 BST 2012
Rank13Aligned Residues157
% Identity24%Templatec3qwyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2
Resolution2.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70...... ...80.........90.........100... ......110..... ....
Predicted Secondary structure 

























.





















...





.......



Query SS confidence 

























.


























. . .











. . . . . . .



Query Sequence  NYIEMKPHPWFFGKIPRAKAEEMLSK. QRHDGAFLIRESESAPGDFSLSVKFGN. . . DVQHFKVLRDGA. . . . . . . GKYF
Query Conservation    
                       .                           ... 
          .......    
Alig confidence 

























.













.











...











.......



Template Conservation           

 
 


  

 

       





 

 . 
 
 


        
 
  
                
Template Sequence  GFDPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSR. PGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVK
Template Known Secondary structure 


GGGGGGGTT

STT

TT
SS.TT


SSSS




TTTT



Template Predicted Secondary structure 

























.

















Template SS confidence 















































































   5....10.........20.........30.........40..... ....50.........60.........70.........80...
 
   120.........130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure 
























































.
Query SS confidence 














































































.
Query Sequence  LWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGAC.
Query Conservation                                             
 
 
 
    


   

 
 

 
   


 
  .
Alig confidence 




























....













































.
Template Conservation       
 

  

  
    
        ....          

  
      

    

 
 
       

     
Template Sequence  IANQSFPDIPALLNHFKMRVLTEASLLAA. . . . YKKPIIEVVVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNA
Template Known Secondary structure  TTSSS
SSS



....





SS
B

SSTTB

B
TT


SSS
T
Template Predicted Secondary structure 





















....
























Template SS confidence 















































































   84.....90.........100.........110.. .......120.........130.........140.........150.........
 
   199200.........210..
Predicted Secondary structure 



Query SS confidence 













Query Sequence  HGQTGMFPRNYVTP
Query Conservation   
  
 





  
Alig confidence 













Template Conservation   
  
  
   

 
Template Sequence  LGTTGLVPANYVQI
Template Known Secondary structure  TS
GGG
Template Predicted Secondary structure 




Template SS confidence 













   160.........170...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions