Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence99.68%DateFri May 25 09:45:29 BST 2012
Rank128Aligned Residues60
% Identity22%Templatec2rqvA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of sh3ci domain of bem1p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170.........180.........190........ .200.........210....
Predicted Secondary structure 





















...





Query SS confidence 











































. . .















Query Sequence  PQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGAC. . . HGQTGMFPRNYVTPVN
Query Conservation          
 
 
 
    


   

 
 

 
   


 
  ... 
  
 





  
 
Alig confidence 











































...















Template Conservation 
    

 




      


   

 
 
       
         
  
  
  

   
Template Sequence  PLGSLYAIVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIID
Template Known Secondary structure 

S


SS




SSSB



SS



TTT

SSSS


STT
B


Template Predicted Secondary structure 


























Template SS confidence 






























































   154.....160.........170.........180.........190.........200.........210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions