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Job DescriptionP62993
Confidence96.32%DateFri May 25 09:45:29 BST 2012
Rank227Aligned Residues137
% Identity33%Templatec2b3oA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40 ....... ..50......
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Query Sequence  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAE. . . . . . . . . . . . . . . . . . . . . LNGKDGF. . . . . IPKNYIEMK
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Template Sequence  FLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT
Template Known Secondary structure 
SSSSSTT
SSS
TTS
S
TT
S
B

SSS

B







GG
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   57..60.........70.........80.........90.........100.... .....110.........120.........130.
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Query Sequence  PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGND. . . . . VQHFKVLRDGAGKYFLWVVKFNSLNEL
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Template Sequence  SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKSPLRVTHIKVMCEGGRYTVGGLETFDSLTDL
Template Known Secondary structure  G
TTB
TT



TT
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B

TTSBBSSSS

BSS
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   132.......
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Query Sequence  VDYHRSTS
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Template Conservation 
  
   
Template Sequence  VEHFKKTG
Template Known Secondary structure 
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   191.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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