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Job DescriptionP62993
Confidence99.82%DateFri May 25 09:45:29 BST 2012
Rank15Aligned Residues142
% Identity23%Templatec2dybA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox)
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGA
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Template Sequence  AEALFDFTGNSKLELNFKAGDVIFLLSRI. NKDWLEGTVRGATGIFPLSFVKILKDFPEEDDP. . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS
B

SSSSB

B
TT

.SSSTTGGG



TT

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   175....180.........190.........200... ......210.........220.........230......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  FLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQ
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLE
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SS

S
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   237..240.........250.........260.........270..
 
   163......170........ .180.........190....... ..200......
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Query Sequence  ALFDFDPQEDGELGFR. . RGDFIHVMDNSDPNWWKGA. . . CHGQTGMFP
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Template Sequence  LTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFP
Template Known Secondary structure  T
S

SSS


STTS

BTTB
S
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   273......280.........290.........300.........310.........320.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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