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Job DescriptionP62993
Confidence96.12%DateFri May 25 09:45:29 BST 2012
Rank229Aligned Residues151
% Identity29%Templatec3ps5A_
PDB info PDB header:hydrolase, signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 6; PDBTitle: crystal structure of the full-length human protein tyrosine2 phosphatase shp-1
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30........ .40....... ..50......
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Query Sequence  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYK. . . . . . . . . . . . . . . . . . . . . AELNGKDGF. . . . . IPKNYIEMK
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Template Sequence  FLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT
Template Known Secondary structure 
SSSTTSTT
SS
SSSS

BSSTTSS

B
SS

B




B




S
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   57..60.........70.........80.........90.........100... ......110.........120.......
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Query Sequence  PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGN. . . . . . . . . DVQHFKVLRDGAGKYFLWVVKFNS
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Template Sequence  SERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDS
Template Known Secondary structure 
STTS



TT
SSSTT
SSSTTS
B
GGG
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   128.130.........140.........150...
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Query Sequence  LNELVDYHRSTSVSRNQQIFLRDIEQ
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Template Sequence  LTDLVEHFKKTGIEEASGAFVYLRQP
Template Known Secondary structure  S
B

TTS

B


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   187..190.........200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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