Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence76.36%DateFri May 25 09:45:29 BST 2012
Rank283Aligned Residues102
% Identity19%Templatec2izvA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100.........110.........120... ......130..
Predicted Secondary structure 























































....








Query SS confidence 


































































. . . .








Query Sequence  PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV. . . . KFNSLNELV
Query Conservation                                                  
                  ....         
Alig confidence 




















.












































....








Template Conservation     

 
 


 


 

   .  
 



 
        


       
 

    
 
 
         
 

  

Template Sequence  NNPCYWGVMDKYAAEALLEGK. PEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLL
Template Known Secondary structure 
TT

TT
.
TT
SSTT
STT
TTS
TT
TTS

BSS
Template Predicted Secondary structure 












.
























Template SS confidence 















































































   283......290.........300... ......310.........320.........330.........340.........350.........360.
 
   133......140.........150.........
Predicted Secondary structure 


























Query SS confidence 


























Query Sequence  DYHRSTSVSRNQQIFLRDIEQVPQQPT
Query Conservation                             
Alig confidence 


























Template Conservation   

            
  
     
 
Template Sequence  EHYKDPSACMFFEPLLSTPLIRTFPFS
Template Known Secondary structure  T

GGG

TTS







S


Template Predicted Secondary structure 





















Template SS confidence 


























   362.......370.........380........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions