Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence94.60%DateFri May 25 09:45:29 BST 2012
Rank234Aligned Residues117
% Identity21%Templatec2cr4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:sh3 domain-binding protein 2; PDBTitle: solution structure of the sh2 domain of human sh3bp2 protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80 .........90.... .....100.........110.....
Predicted Secondary structure 






























......










.












Query SS confidence 





































. . . . . .













.




















Query Sequence  GKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHD. . . . . . GAFLIRESESAPGD. FSLSVKFGNDVQHFKVLRDGA
Query Conservation     
  
   
                           ......              .          
          
Alig confidence 





































......













.




















Template Conservation                 
          
  
        
    

 



 
    
    

      


  
     
Template Sequence  GSSGSSGEDYEKVPLPNSVFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDS
Template Known Secondary structure 










S
SS
TTTB
S


STTS


TT

SSTT
TTTT


TT
Template Predicted Secondary structure 










































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   116...120.........130.........140.........150.........
Predicted Secondary structure 











































Query SS confidence 











































Query Sequence  GKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPT
Query Conservation                                              
Alig confidence 











































Template Conservation           
 

 


 

   

       

 
 
    
 
Template Sequence  KFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLLLRHPYGYTSGPS
Template Known Secondary structure  SSSS
SSTTS

SSSSS



SBSS



TT
Template Predicted Secondary structure 
























Template SS confidence 











































   81........90.........100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions