Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence99.81%DateFri May 25 09:45:29 BST 2012
Rank20Aligned Residues149
% Identity30%Templatec2ablA_
PDB info PDB header:transferaseChain: A: PDB Molecule:abl tyrosine kinase; PDBTitle: sh3-sh2 domain fragment of human bcr-abl tyrosine kinase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60. ........70.........
Predicted Secondary structure 


































...

















Query SS confidence 


























































. . .

















Query Sequence  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWF. . . FGKIPRAKAEEMLSKQRH
Query Conservation 




 
      


   

 
 

       
         
  
   
        ...                  
Alig confidence 


























































...

















Template Conservation    
   
      

 
  

   
       

         
  
  

    


   

 
 
 
 


 

    
Template Sequence  FVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGI
Template Known Secondary structure  SS
B

SSSSB

B
TT

TTSSTTGGGSS
GGGSTT

TSS

Template Predicted Secondary structure 













































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   80.........90.........100.........110.........120. ........130.........140.........150.
Predicted Secondary structure 






























.





























Query SS confidence 









































.





























Query Sequence  DGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLW. VVKFNSLNELVDYHRSTSVSRNQQIFLRDI
Query Conservation                           
                .                              
Alig confidence 









































.





























Template Conservation   





 
        

        
  
               
 

  

  
      
   
  
 
Template Sequence  NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAP
Template Known Secondary structure  TT

SS
TT
TT
TTS
SSSS
SS

TTSSS






Template Predicted Secondary structure 





































Template SS confidence 








































































   165....170.........180.........190.........200.........210.........220.........230.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions