Return to main results Retrieve Phyre Job Id

Job DescriptionP62993
Confidence99.76%DateFri May 25 09:45:29 BST 2012
Rank29Aligned Residues74
% Identity26%Templatec2cubA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150.........160.........170.........180.........190.........200.........210......
Predicted Secondary structure 









































Query SS confidence 









































































Query Sequence  NQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRN
Query Conservation                      
 
 
 
    


   

 
 

 
   


 
   
  
 





  
   
Alig confidence 









































































Template Conservation 
      
          
 
 


      



  

 
 
       
      
  
  
  

      
Template Sequence  SSGSSGDPGERLYDLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEGDS
Template Known Secondary structure 





SSS

B



SS




STTB



TT
TTSTTGGG



Template Predicted Secondary structure 





































Template SS confidence 









































































   2.......10.........20.........30.........40.........50.........60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions