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Job DescriptionP62993
Confidence27.50%DateFri May 25 09:45:29 BST 2012
Rank318Aligned Residues116
% Identity17%Templatec2xp1A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  DGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQ. .
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Template Sequence  TDDFLIRKG. SRHGYCVLVIKFASDVFVHMKIEEHSEHYTCSNKHFEDIDEVISVYVRPILRNLKSIKAHAKYFNSPEDA
Template Known Secondary structure  S


.SSTTTT
SS
TTSSTSTTB
S
TTTS
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   811........ 820.........830.........840.........850.........860.........870.........880.........
 
   158.160.........170.... .....180.........190......
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Query Sequence  . . . . . . . . PTYVQALFDFDPQEDGE. . LGFRRGDFIHVMDNSDPNWWKG
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Template Sequence  EKLLSSFDGSKVVYAFYFSRKYPGKLTFAYNNGSILEEYIGVSDMLTYN
Template Known Secondary structure  T

SSS

SSSTTSSSSSST
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   890.........900.........910.........920.........930........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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