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Job DescriptionP62993
Confidence95.26%DateFri May 25 09:45:29 BST 2012
Rank231Aligned Residues159
% Identity27%Templatec2shpA_
PDB info PDB header:tyrosine phosphataseChain: A: PDB Molecule:shp-2; PDBTitle: tyrosine phosphatase shp-2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30......... 40....... ..50......
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Query Sequence  AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKA. . . . . . . . . . . . . . . . . . . . . ELNGKDGF. . . . . IPKNYIEMK
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Template Sequence  FLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPT
Template Known Secondary structure 
SSSTT
TT
SSS
TTS
SST
TT
SBSSSS
B









T
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   57..60.........70.........80.........90.........100.... .....110.........120.........130.
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Query Sequence  PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGND. . . . . VQHFKVLRDGAGKYFLWVVKFNSLNEL
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Template Sequence  SERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDL
Template Known Secondary structure  T
TTB

S

T

TT
SSSTT







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BSS
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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   132.......140.........150.........160.
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Query Sequence  VDYHRSTSVSRNQQIFLRDIEQVPQQPTYV
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Template Conservation 
  
   
        
 
  
   
 
 
Template Sequence  VEHYKKNPMVETLGTVLQLKQPLNTTRINA
Template Known Secondary structure  S

B
TTS
B






S
G
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   194.....200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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