Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.92%DateSat Jun 16 10:34:35 BST 2012
Rank47Aligned Residues93
% Identity30%Templatec2c9wA_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280.........290.........300.........310.........320.........330.........340. ......
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Query Sequence  KFAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI. . . . . . . . GQRKFS
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Template Sequence  ELGQTGWYWGSMTVNEAKEKLKEA. PEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFD
Template Known Secondary structure  TS
B
TT

TTS.
TT


STT
STTTT
TTTTTGGG


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   42.......50.........60..... ....70.........80.........90.........100.........110.........120
 
   348.350.........360.........370......
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Query Sequence  TMEELVEHYKKAPIFTSEQGEKLYLVKHL
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Template Sequence  SVVHLIDYYVQMC. . . . . . . KHLYLTKPL
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B
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   121........130... ......140..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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