Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.66%DateSat Jun 16 10:34:35 BST 2012
Rank134Aligned Residues59
% Identity39%Templatec3rebD_
PDB info PDB header:protein bindingChain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40... ......50.........60.
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Query Sequence  EEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRN. SMNKTGFVPSNYVERKNS
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Template Sequence  EDIIVVALYDYVSWSPDDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDS
Template Known Secondary structure 


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   7980.........90.........100.........110.........120.........130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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