Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.73%DateSat Jun 16 10:34:35 BST 2012
Rank106Aligned Residues78
% Identity23%Templatec3or8A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   279280.........290.........300.........310.........320.. .......330..... ....340.........
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Query Sequence  GNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLK. AQGKNKHFKVQLK. . . . . . . . ETVYCIGQRKFSTM
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Template Sequence  NHPYYF. PFNGKQAEDYLRSKE. RGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENPLALGKVLVVEGQRYHDL
Template Known Secondary structure 

TT.


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   5....10 .........20..... ....30.........40.........50.........60.........70.........80..
 
   350........
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Query Sequence  EELVEHYKK
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Template Sequence  DQIIVEYLQ
Template Known Secondary structure  T
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   83......90.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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