Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.94%DateSat Jun 16 10:34:35 BST 2012
Rank27Aligned Residues105
% Identity24%Templatec2gsbA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ras gtpase-activating protein 1; PDBTitle: solution structure of the second sh2 domain of human ras2 gtpase-activating protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310.........320.........330... ......340......
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Query Sequence  YIRPSLTGKFAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQ. LKETVYCIGQRKF
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Template Sequence  GSSGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYY
Template Known Secondary structure  S

SS


SGGG
SSB

SS
T

SS
SSSTT

SS
B



TTTSS

B
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   347..350.........360.........370.......
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Query Sequence  STMEELVEHYKKAPIFTSEQGEKLYLVKHLS
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Template Sequence  NSIGDIIDHYRKEQI. . . . . VEGYYLKEPVP
Template Known Secondary structure  S
TTS
S.....BTTB






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   84.....90........ .100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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