Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.94%DateSat Jun 16 10:34:35 BST 2012
Rank23Aligned Residues101
% Identity35%Templatec1x6cA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: solution structures of the sh2 domain of human protein-2 tyrosine phosphatase shp-1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   275....280.........290.........300.........310.........320...... ...330.........340....
Predicted Secondary structure 



























.........




.
Query SS confidence 



















































. . . . . . . . .

















.
Query Sequence  GKFAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGK. . . . . . . . . NKHFKVQLKETVYCIGQR.
Query Conservation         
  
   
  
   
      
 



 
        

      .........  
  
            .
Alig confidence 



















































.........

















.
Template Conservation         



 


 


 

      
 



 
      
 


          
     
  
             
Template Sequence  GSSGSSGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLE
Template Known Secondary structure 

S






SS



SS
SSSTT
SSSTTS
TTSSSS
Template Predicted Secondary structure 






































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   345....350.........360.........370......
Predicted Secondary structure 













Query SS confidence 































Query Sequence  KFSTMEELVEHYKKAPIFTSEQGEKLYLVKHL
Query Conservation   
  
  

  
   

          
  
 
Alig confidence 
















.













Template Conservation   
 

  

  
    
.    
    
  
 
Template Sequence  TFDSLTDLVEHFKKTGI. EEASGAFVYLRQPY
Template Known Secondary structure 
BSS
.
SSS




Template Predicted Secondary structure 






.









Template SS confidence 































   81........90....... ..100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions