Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.49%DateSat Jun 16 10:34:35 BST 2012
Rank276Aligned Residues56
% Identity25%Templatec1bb9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:amphiphysin 2; PDBTitle: crystal structure of the sh3 domain from rat amphiphysin 2
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.. .......40.. .......50.........60
Predicted Secondary structure 

















.....



..........








Query SS confidence 



























. . . . .









. . . . . . . . . .

















Query Sequence  VVVVAKFDYVAQQEQELDIKKNERLWLL. . . . . DDSKSWWRVR. . . . . . . . . . NSMNKTGFVPSNYVERKN
Query Conservation    






 
    



  

 
 

.....   
 

   ..........   
  
 

 



   
Alig confidence 



























.....









..........

















Template Conservation    
 


 
      


   

 
 
         



  
             
  
 

 


  
 
Template Sequence  FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
Template Known Secondary structure  SS
B

SSTTB

B
TT


S
GGG

TTTT


GGG
Template Predicted Secondary structure 






































Template SS confidence 






































































   24.....30.........40.........50.........60.........70.........80.........90....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions