Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.70%DateSat Jun 16 10:34:35 BST 2012
Rank111Aligned Residues74
% Identity22%Templatec2cubA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70....
Predicted Secondary structure 
















































Query SS confidence 









































































Query Sequence  MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERKNSARKASIVKNLKDT
Query Conservation        






 
    



  

 
 

   
 

      
  
 

 



                 
Alig confidence 









































































Template Conservation        
 
 


      



  

 
 
       
      
  
  
  

                
 
Template Sequence  YDLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEGDSPLGDHVGSGPSS
Template Known Secondary structure 



SS




STTB



TT
TTSTTGGG




SSS


SS


Template Predicted Secondary structure 





































Template SS confidence 









































































   14.....20.........30.........40.........50.........60.........70.........80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions