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Job DescriptionP16333
Confidence100.00%DateSat Jun 16 10:34:35 BST 2012
Rank2Aligned Residues166
% Identity31%Templatec2fo0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase abl1 (1b isoform); PDBTitle: organization of the sh3-sh2 unit in active and inactive forms of the2 c-abl tyrosine kinase
Resolution2.27 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  AAVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVGLVPKNYVTVMQNNPLTSGL
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Template Sequence  KENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGY. NHNGEWCEAQT. KNGQGWVPSNYITPVNS. . . . . . .
Template Known Secondary structure 
TTTT

GGGS
TTSS
B


STTB

B
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   70.........80.........90.........100.........110.. .......120... ......130.........140
 
   260.........270.........280.........290.........300.........310.........320.........330..... ...
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Query Sequence  EPSPPQCDYIRPSLTGKFAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLK. ETV
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Template Sequence  . . . . . . . . . . . . . . . . . LEKHSWYHGPVSRNAAEYLLSSG. INGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGK
Template Known Secondary structure  .................GGGSTT

TSSS.
TT
SSSTT
TT
TTS
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   141........150.........160... ......170.........180.........190.........200..
 
   339340.... .....350.........360.........370.......
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Query Sequence  YCIGQR. KFSTMEELVEHYKKAPIFTSEQGEKLYLVKHLS
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Template Sequence  LYVSSESRFNTLAELVHHHSTVAD. . . . . GLITTLHYPAP
Template Known Secondary structure  SSTT

BSS

T.....TSSS




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   203......210.........220...... ...230.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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