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Job DescriptionP16333
Confidence99.90%DateSat Jun 16 10:34:35 BST 2012
Rank71Aligned Residues174
% Identity18%Templatec1a81E_
PDB info PDB header:complex (transferase/peptide)Chain: E: PDB Molecule:syk kinase; PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.... .....250.........260
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Query Sequence  HVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVGLVPK. . . . . . . . . . . . NYVTVMQNNPLTSGLE
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Template Sequence  GLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRT. . . . HASPADLCHYHSQESDGLVCLLKKPFNRPQG
Template Known Secondary structure  T
SSSTT

SSSTTTTTS

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SB



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   37..40.........50.........60.........70.........80. ........90.........100.........110..
 
   261........270.........280.........290.........300 .........310.........320.........330..... ...
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Query Sequence  PSPPQCDYIRPSLTGKFAGNPWYYGKVTRHQAEMALNERG. HEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLK. ETV
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Template Sequence  VQPKTPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRAR. DNNGSYALCLLHEGKVLHYRIDKDKTGK
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TSGGG
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   113......120.........130.........140.........150.........160... ......170.........180.........190.
 
   339340.... .....350.........360.........370......
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Query Sequence  YCIGQR. KFSTMEELVEHYKKAPIFTSEQGEKLYLVKHL
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Template Sequence  LSIPEGKKFDTLWQLVEHYSYKAD. . . . . GLLRVLTVPC
Template Known Secondary structure 
TTS

BS
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   226...230.........240......... 250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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