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Job DescriptionP16333
Confidence100.00%DateSat Jun 16 10:34:35 BST 2012
Rank11Aligned Residues211
% Identity25%Templatec1griA_
PDB info PDB header:signal transduction adaptorChain: A: PDB Molecule:growth factor bound protein 2; PDBTitle: grb2
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  VVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERKNSARKASIVKNLKDTLGIGKVKRKP
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Template Sequence  MEAIAKYDFKATADDELSFKRGDILKV. . . . QNWYKAEL. NGKDGFIPKNYIEMKP. . . . . . . . . . . . . . . . . . . . . . . .
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S
B


SSS


B
TT

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S.SS
GGG


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   1........10.........20....... ..30..... ....40.........50.
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  SVPDSASPADDSFVDPGERLYDLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEG
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Template Sequence  . HPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFK. . . . . . VLRDGAGKYFLWVVKFNSLNE
Template Known Secondary structure  .
SSB
TT

T
SSTT

SSSTT
TT......
SSS
SSS
SS
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   58.60.........70.........80.........90.........100......... 110.........120.........130
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  DSPLGDHVGSLSEKLAAVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVGLVPK
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Template Sequence  LVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDN. . SDPNWWKG. ACHGQTGMFPR
Template Known Secondary structure  S
SSSSTT



B








SS



SSTTB



TT

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G
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   131........140.........150.........160.........170.........180........ .190...... ...200.......
 
   245....250....
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Query Sequence  NYVTVMQNNP
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Template Sequence  NYVTPVNRNV
Template Known Secondary structure  GG



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   208.210.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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