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Job DescriptionP16333
Confidence99.78%DateSat Jun 16 10:34:35 BST 2012
Rank100Aligned Residues180
% Identity18%Templatec1mv3A_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  LKDTLGIGKVKRKPSVPDSASPADDSFVDPGERLYDLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNG
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Template Sequence  AATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEV
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   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   151........160.........170....... ..180.........190.........200.........210....
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Query Sequence  QVGWFPSNYVTEEGDSPLGDHVGSLSE. . . . . . . . . . . . . . . . KLAAVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKG
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Template Sequence  AGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTDELQLKAG
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   354.....360.........370.........380.........390.........400.........410.........420.........430...
 
   215....220... ......230... ......240.........250
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Query Sequence  DVMDVIEKP. . . ENDPEWWKCR. . . . . . . . . KINGMVGLVPKNYVTVM
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Template Sequence  DVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV
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TTTGGGGGGT
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   434.....440.........450.........460.........470.........480.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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