Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence100.00%DateSat Jun 16 10:34:35 BST 2012
Rank5Aligned Residues160
% Identity33%Templatec2ablA_
PDB info PDB header:transferaseChain: A: PDB Molecule:abl tyrosine kinase; PDBTitle: sh3-sh2 domain fragment of human bcr-abl tyrosine kinase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220.........230.........240.........250.........260....
Predicted Secondary structure 

























































Query SS confidence 















































































Query Sequence  NLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVGLVPKNYVTVMQNNPLTSGLEPSPP
Query Conservation              


        

    
  
 
         
       
  
  
   
                 
Alig confidence 





































..



























............
Template Conservation    
         
   
      

 
  

   
   ..    

         
  
  

    
............
Template Sequence  MGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGY. . NHNGEWCEAQTKNGQGWVPSNYITPVNS. . . . . . . . . . . .
Template Known Secondary structure 

S
TT
TTSS
B

SSSSB

B
TT
..
TTSSTTGGGSS
............
Template Predicted Secondary structure 
























..














............
Template SS confidence 















































































   75....80.........90.........100.........110.. .......120.........130.........140
 
   265....270.........280.........290.........300.........310.........320.........330..... ....340...
Predicted Secondary structure 






































.



Query SS confidence 






































































.







Query Sequence  QCDYIRPSLTGKFAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLK. ETVYCIGQ
Query Conservation        
          
  
   
  
   
      
 



 
        

        
  
   .        
Alig confidence  ............






















.


































.







Template Conservation  ............

   

 
 
 
 


 

   .  





 
        

        
  
            
Template Sequence  . . . . . . . . . . . . LEKHSWYHGPVSRNAAEYLLSSG. INGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSS
Template Known Secondary structure  ............GGGSTT

TSS
.
TT

SS
TT
TT
TTS
SSS
Template Predicted Secondary structure  ............













.




















Template SS confidence 















































































   141........150.........160... ......170.........180.........190.........200.......
 
   344 .....350.........360.........370......
Predicted Secondary structure  .













Query SS confidence 
.































Query Sequence  R. KFSTMEELVEHYKKAPIFTSEQGEKLYLVKHL
Query Conservation   . 
  
  

  
   

          
  
 
Alig confidence 
.
















.....









Template Conservation     
 

  

  
     ..... 
   
  
 
Template Sequence  ESRFNTLAELVHHHSTVAD. . . . . GLITTLHYPA
Template Known Secondary structure  S
SS

T.....TSSS





Template Predicted Secondary structure 






.....









Template SS confidence 

































   208.210.........220...... ...230......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions