Return to main results Retrieve Phyre Job Id

Job DescriptionP16333
Confidence99.91%DateSat Jun 16 10:34:35 BST 2012
Rank57Aligned Residues102
% Identity27%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   275....280.........290.........300.........310.........320.........330.........340.... .....350...
Predicted Secondary structure 
































.


Query SS confidence 





































































.








Query Sequence  GKFAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQR. KFSTMEELV
Query Conservation         
  
   
  
   
      
 



 
        

        
  
            . 
  
  

Alig confidence 
























.











































.








Template Conservation    
    

 
 


  

 

   .  
 



 
        


       
  
        
     
 

  

Template Sequence  QDLSVHLWYAGPMERAGAESILANR. SDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELV
Template Known Secondary structure  S
STTSSSS

S.
TTB

SSS
S
SSS
TTSSSSSSS
Template Predicted Secondary structure 













.























Template SS confidence 















































































   664.....670.........680........ .690.........700.........710.........720.........730.........740..
 
   354.....360.........370.......
Predicted Secondary structure 











Query SS confidence 























Query Sequence  EHYKKAPIFTSEQGEKLYLVKHLS
Query Conservation    
   

          
  
  
Alig confidence 























Template Conservation    
           
   
  
  
Template Sequence  EFYQQNSLKDCFKSLDTTLQFPFK
Template Known Secondary structure  TTS
SSS





B
S
Template Predicted Secondary structure 
















Template SS confidence 























   743......750.........760......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions