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Job DescriptionP16333
Confidence100.00%DateSat Jun 16 10:34:35 BST 2012
Rank10Aligned Residues153
% Identity33%Templatec1g83A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fyn; PDBTitle: crystal structure of fyn sh3-sh2
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260.........270..
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Query Sequence  HVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVGLVPKNYVTVMQNNPLTSGLEPSPPQCDYIRPS
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Template Sequence  TLFVALYDYEARTEDDLSFHKGEKFQILNS. SEGDWWEARSLTTGETGYIPSNYVAPVDS. . . . . . . . . . . . . . . . . . . .
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SS
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SSSB

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GGGTTS....................
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   85....90.........100.........110.... .....120.........130.........140...
 
   273......280.........290.........300 .........310.........320... ......330... ......340....
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Query Sequence  LTGKFAGNPWYYGKVTRHQAEMALNERG. HEGDFLIRDSESSPNDFSVSLKA. . . . . QGKNKHFKVQ. LKETVYCIGQR.
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Template Sequence  . . . . IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRA
Template Known Secondary structure  ....GGGSSSB
TT

STT

TT

SSSTT

SSS

TTS
TTT
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   144.....150.........160.........170.........180.........190.........200.........210.........
 
   345....350.........360.........370.....
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Query Sequence  KFSTMEELVEHYKKAPIFTSEQGEKLYLVKH
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Template Sequence  QFETLQQLVQHYSERAA. . . . . GLSSRLVVP
Template Known Secondary structure  SS

T.....TSSS




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   220.........230...... ...240.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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