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Job DescriptionP16333
Confidence99.91%DateSat Jun 16 10:34:35 BST 2012
Rank49Aligned Residues95
% Identity27%Templatec1ka6A_
PDB info PDB header:immune systemChain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   277..280.........290.........300.........310.........320.........330.........340. ........
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Query Sequence  FAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI. . . . . . . GQRKFSTM
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Template Sequence  MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKI
Template Known Secondary structure 



SSB

S



TT

SSSTT
SSS

TTS

STTS


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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   350.........360.........370......
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Query Sequence  EELVEHYKKAPIFTSEQGEKLYLVKHL
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Template Sequence  KNLISAFQKPDQ. . . . . GIVIPLQYPV
Template Known Secondary structure  TTSS
S.....SSSS


SB
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   81........90.. .......100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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