Job Description P16333 Confidence 21.42% Date Sat Jun 16 10:34:35 BST 2012
Rank 374 Aligned Residues 48
% Identity 13% Template c3m1uB_
PDB info
PDB header: hydrolaseChain: B: PDB Molecule: putative gamma-d-glutamyl-l-diamino acid endopeptidase;
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution
Resolution 1.75 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
11 . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . .
. 40 . . . . . . . . . 50 . . . . . . . . . 60
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
F D Y V A Q Q E Q E L D I K K N E R L W L L D D S K S W .
W R V R N S M N K T G F V P S N Y V E R K N
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
Y P F D X F Q R T .
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A V W X G T P V F V G H A T A D R A W L Y V E T A F A A G W X P A A D V A R V D
Template Known Secondary structure  
T T T T . . T T T T S S S S G G G
Template Predicted Secondary structure  
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Template SS confidence  
   
176 . . . 180 . . . .
. . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]