Phyre 2 Results for Q8IXH6

Email | l.a.kelley@imperial.ac.uk
Description | Q8IXH6
Date | Thu Apr 26 09:34:36 BST 2012
Unique Job ID | 544235acab21f8f4

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3npeA_ |
|  | 36.6 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:9-cis-epoxycarotenoid dioxygenase 1, chloroplastic; PDBTitle: structure of vp14 in complex with oxygen
2 | c3r8kB_ |
|  | 34.5 | 15 | PDB header:apoptosis Chain: B: PDB Molecule:heme-binding protein 2; PDBTitle: crystal structure of human soul protein (hexagonal form)
3 | c3fsnA_ |
|  | 30.4 | 18 | PDB header:isomerase Chain: A: PDB Molecule:retinal pigment epithelium-specific 65 kda protein; PDBTitle: crystal structure of rpe65 at 2.14 angstrom resolution
4 | c2biwC_ |
|  | 29.0 | 29 | PDB header:oxidoreductase Chain: C: PDB Molecule:apocarotenoid-cleaving oxygenase; PDBTitle: crystal structure of apocarotenoid cleavage oxygenase from2 synechocystis, native enzyme
5 | d2gova1 |
|  | 28.4 | 3 | Fold:Probable bacterial effector-binding domain Superfamily:Probable bacterial effector-binding domain Family:SOUL heme-binding protein
6 | d2o5aa1 |
|  | 21.2 | 47 | Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Iojap/YbeB-like
7 | d1sgva2 |
|  | 20.4 | 27 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
8 | c3upsA_ |
|  | 20.2 | 27 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:iojap-like protein; PDBTitle: crystal structure of iojap-like protein from zymomonas mobilis
9 | d2id1a1 |
|  | 19.1 | 33 | Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Iojap/YbeB-like
10 | d2cfua2 |
|  | 17.6 | 25 | Fold:Metallo-hydrolase/oxidoreductase Superfamily:Metallo-hydrolase/oxidoreductase Family:Alkylsulfatase-like
11 | d1ee8a2 |
|  | 17.3 | 23 | Fold:N-terminal domain of MutM-like DNA repair proteins Superfamily:N-terminal domain of MutM-like DNA repair proteins Family:N-terminal domain of MutM-like DNA repair proteins
12 | c1xk5A_ |
|  | 14.5 | 30 | PDB header:transport protein Chain: A: PDB Molecule:snurportin-1; PDBTitle: crystal structure of the m3g-cap-binding domain of2 snurportin1 in complex with a m3gpppg-cap dinucleotide
13 | c2cfuA_ |
|  | 13.3 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:sdsa1; PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid.
14 | c2i82D_ |
|  | 12.8 | 12 | PDB header:lyase/rna Chain: D: PDB Molecule:ribosomal large subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridine synthase rlua: indirect2 sequence readout through protein-induced rna structure
15 | d1oa8a_ |
|  | 12.7 | 30 | Fold:AXH domain Superfamily:AXH domain Family:AXH domain
16 | c1k82D_ |
|  | 11.9 | 38 | PDB header:hydrolase/dna Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
17 | d1q1oa_ |
|  | 11.5 | 20 | Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain
18 | c3km5B_ |
|  | 11.4 | 8 | PDB header:cell invasion Chain: B: PDB Molecule:lysine specific cysteine protease; PDBTitle: crystal structure analysis of the k2 cleaved adhesin domain of lys-2 gingipain (kgp)
19 | c3gjxE_ |
|  | 11.1 | 28 | PDB header:protein transport Chain: E: PDB Molecule:snurportin-1; PDBTitle: crystal structure of the nuclear export complex crm1-2 snurportin1-rangtp
20 | c3ce8A_ |
|  | 10.5 | 42 | PDB header:unknown function Chain: A: PDB Molecule:putative pii-like nitrogen regulatory protein; PDBTitle: crystal structure of a duf3240 family protein (sbal_0098) from2 shewanella baltica os155 at 2.40 a resolution
21 | c3hxrA_ |
| not modelled | 10.1 | 19 | PDB header:structural protein Chain: A: PDB Molecule:nucleoporin nup120; PDBTitle: nucleoporin nup120 from s.cerevisiae (aa 1-757)
22 | d2apoa2 |
| not modelled | 9.9 | 21 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
23 | d3proc2 |
| not modelled | 9.6 | 67 | Fold:Alpha-lytic protease prodomain-like Superfamily:Alpha-lytic protease prodomain Family:Alpha-lytic protease prodomain
24 | d1sr4a_ |
| not modelled | 9.4 | 43 | Fold:beta-Trefoil Superfamily:Ricin B-like lectins Family:Ricin B-like
25 | c1sr4A_ |
| not modelled | 9.4 | 43 | PDB header:toxin Chain: A: PDB Molecule:cytolethal distending toxin subunit a; PDBTitle: crystal structure of the haemophilus ducreyi cytolethal2 distending toxin
26 | c2i7fB_ |
| not modelled | 9.3 | 50 | PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin component of dioxygenase; PDBTitle: sphingomonas yanoikuyae b1 ferredoxin
27 | d1p5dx4 |
| not modelled | 8.8 | 29 | Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain
28 | d1v9ka_ |
| not modelled | 8.7 | 24 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
29 | d1k3xa2 |
| not modelled | 8.2 | 18 | Fold:N-terminal domain of MutM-like DNA repair proteins Superfamily:N-terminal domain of MutM-like DNA repair proteins Family:N-terminal domain of MutM-like DNA repair proteins
30 | c3i0uA_ |
| not modelled | 8.2 | 59 | PDB header:lyase Chain: A: PDB Molecule:phosphothreonine lyase ospf; PDBTitle: structure of the type iii effector/phosphothreonine lyase ospf from2 shigella flexneri
31 | c1k8wA_ |
| not modelled | 8.0 | 29 | PDB header:lyase/rna Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna
32 | c3zv0D_ |
| not modelled | 7.7 | 44 | PDB header:cell cycle Chain: D: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1p-cbf5p complex
33 | d1aisb1 |
| not modelled | 7.6 | 43 | Fold:Cyclin-like Superfamily:Cyclin-like Family:Transcription factor IIB (TFIIB), core domain
34 | d1xzwa1 |
| not modelled | 7.6 | 67 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Purple acid phosphatase, N-terminal domain Family:Purple acid phosphatase, N-terminal domain
35 | c3fkaD_ |
| not modelled | 7.1 | 17 | PDB header:unknown function Chain: D: PDB Molecule:uncharacterized ntf-2 like protein; PDBTitle: crystal structure of a ntf-2 like protein of unknown function2 (spo1084) from silicibacter pomeroyi dss-3 at 1.69 a resolution
36 | d1usra_ |
| not modelled | 7.0 | 29 | Fold:6-bladed beta-propeller Superfamily:Sialidases Family:Sialidases (neuraminidases)
37 | d1pqsa_ |
| not modelled | 6.9 | 22 | Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain
38 | c2fugC_ |
| not modelled | 6.9 | 44 | PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
39 | c3dukD_ |
| not modelled | 6.7 | 12 | PDB header:unknown function Chain: D: PDB Molecule:ntf2-like protein of unknown function; PDBTitle: crystal structure of a ntf2-like protein of unknown function2 (mfla_0564) from methylobacillus flagellatus kt at 2.200 a resolution
40 | c3s63B_ |
| not modelled | 6.5 | 25 | PDB header:lipid binding protein Chain: B: PDB Molecule:saposin-like protein; PDBTitle: saposin-like protein na-slp-1
41 | d1wjfa_ |
| not modelled | 6.2 | 14 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase
42 | d2ey4a2 |
| not modelled | 6.1 | 18 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
43 | d1wfwa_ |
| not modelled | 5.9 | 19 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
44 | d1e0ea_ |
| not modelled | 5.9 | 24 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase
45 | d1r3ea2 |
| not modelled | 5.9 | 21 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
46 | c2eouA_ |
| not modelled | 5.8 | 100 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 370-2 400) of human zinc finger protein 473
47 | d1d0qa_ |
| not modelled | 5.8 | 50 | Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:DNA primase zinc finger
48 | c3hefB_ |
| not modelled | 5.8 | 28 | PDB header:viral protein Chain: B: PDB Molecule:gene 1 protein; PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
49 | c2v0xB_ |
| not modelled | 5.7 | 22 | PDB header:cell cycle Chain: B: PDB Molecule:lamina-associated polypeptide 2 isoforms PDBTitle: the dimerization domain of lap2alpha
50 | c2gu1A_ |
| not modelled | 5.7 | 36 | PDB header:hydrolase Chain: A: PDB Molecule:zinc peptidase; PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
51 | c3m1hB_ |
| not modelled | 5.7 | 14 | PDB header:cell invasion Chain: B: PDB Molecule:lysine specific cysteine protease; PDBTitle: crystal structure analysis of the k3 cleaved adhesin domain of lys-2 gingipain (kgp) from porphyromonas gingivalis w83
52 | c3cs5B_ |
| not modelled | 5.7 | 86 | PDB header:photosynthesis Chain: B: PDB Molecule:phycobilisome degradation protein nbla; PDBTitle: nbla protein from synechococcus elongatus pcc 7942
53 | d1xe0a_ |
| not modelled | 5.6 | 32 | Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Nucleoplasmin-like core domain Family:Nucleoplasmin-like core domain
54 | d1v3ea_ |
| not modelled | 5.5 | 29 | Fold:6-bladed beta-propeller Superfamily:Sialidases Family:Sialidases (neuraminidases)
55 | d3d32a1 |
| not modelled | 5.5 | 24 | Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:GABARAP-like
56 | c2jeuA_ |
| not modelled | 5.5 | 50 | PDB header:transcription Chain: A: PDB Molecule:regulatory protein e2; PDBTitle: transcription activator structure reveals redox control of2 a replication initiation reaction
57 | d2f2fa1 |
| not modelled | 5.4 | 43 | Fold:beta-Trefoil Superfamily:Ricin B-like lectins Family:Ricin B-like
58 | c2c2xB_ |
| not modelled | 5.4 | 26 | PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase- PDBTitle: three dimensional structure of bifunctional2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase3 from mycobacterium tuberculosis
59 | d3e9la1 |
| not modelled | 5.4 | 28 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Prp8 beta-finger domain-like
60 | d1wj6a_ |
| not modelled | 5.3 | 27 | Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain