01/05/2012 05:25:28 : INFO  : Run start: Tue May  1 05:25:28 BST 2012
01/05/2012 05:25:28 : INFO  : Initialised job
01/05/2012 05:25:28 : INFO  : Initialised job:
Sequence
>batch____
MFQRLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRP
PPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPG
SPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAE
RHALSAKAVQRQNRARESRPRRSKNQSSFIYQPCQRQFNY

01/05/2012 05:25:28 : INFO  : Checked sequence
01/05/2012 05:25:28 : INFO  : Finding homologues with PSI-BLAST
01/05/2012 05:25:28 : INFO  : PSI-BLAST 3 iterations
01/05/2012 05:26:37 : INFO  : PSI-BLAST 5 iterations
01/05/2012 05:27:12 : INFO  : Finished PSI-BLAST
01/05/2012 05:27:12 : INFO  : Running Buildali to generate a3m file
01/05/2012 05:28:41 : INFO  : Converting to HMM
01/05/2012 05:28:41 : INFO  : Calibrating HMM
01/05/2012 05:28:46 : INFO  : Searching HMM database
01/05/2012 05:32:29 : INFO  : Finished buildali
01/05/2012 05:32:29 : INFO  : Predicting secondary structure
01/05/2012 05:32:30 : INFO  : Predicted secondary structure (PSI-Pred)
01/05/2012 05:32:30 : INFO  : Predicting Disordered regions
01/05/2012 05:32:30 : INFO  : Predicted Disorder (Disopred)
01/05/2012 05:32:30 : INFO  : Running memsat_svm check
01/05/2012 05:33:07 : INFO  : Globular protein
01/05/2012 05:33:07 : INFO  : Predicted Transmembrane (memsat_svm) ID '544235acab21f8f4'
01/05/2012 05:33:07 : INFO  : Initialising fold library search
01/05/2012 05:33:07 : INFO  : Initialised search input
01/05/2012 05:33:07 : INFO  : Building Ensemble models
01/05/2012 05:33:07 : INFO  : Building hh.c3npeA_.model.1.pdb
01/05/2012 05:33:08 : INFO  : Building c3npeA_.1.pdb
01/05/2012 05:33:08 : INFO  : Building c3r8kB_.2.pdb
01/05/2012 05:33:09 : INFO  : Building c3fsnA_.3.pdb
01/05/2012 05:33:11 : INFO  : Building c2biwC_.4.pdb
01/05/2012 05:33:12 : INFO  : Building d2gova1.5.pdb
01/05/2012 05:33:12 : INFO  : Building d2o5aa1.6.pdb
01/05/2012 05:33:13 : INFO  : Building d1sgva2.7.pdb
01/05/2012 05:33:13 : INFO  : Building c3upsA_.8.pdb
01/05/2012 05:33:14 : INFO  : Building d2id1a1.9.pdb
01/05/2012 05:33:14 : INFO  : Building d2cfua2.10.pdb
01/05/2012 05:33:15 : INFO  : Building d1ee8a2.11.pdb
01/05/2012 05:33:16 : INFO  : Building c1xk5A_.12.pdb
01/05/2012 05:33:17 : INFO  : Building c2cfuA_.13.pdb
01/05/2012 05:33:17 : INFO  : Building c2i82D_.14.pdb
01/05/2012 05:33:18 : INFO  : Building d1oa8a_.15.pdb
01/05/2012 05:33:18 : INFO  : Building c1k82D_.16.pdb
01/05/2012 05:33:19 : INFO  : Building d1q1oa_.17.pdb
01/05/2012 05:33:20 : INFO  : Building c3km5B_.18.pdb
01/05/2012 05:33:20 : INFO  : Building c3gjxE_.19.pdb
01/05/2012 05:33:21 : INFO  : Building c3ce8A_.20.pdb
01/05/2012 05:33:22 : INFO  : Finished HH model building
01/05/2012 05:33:22 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
01/05/2012 05:33:25 : INFO  : html domain output complete ID '544235acab21f8f4'
01/05/2012 05:34:00 : INFO  : Run end  : Tue May  1 05:34:00 BST 2012
