Phyre 2 alignment of Q8IXH6 with d1k5ja_

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Job Description | Q8IXH6
Confidence | 3.84% | Date | Thu Apr 26 09:34:36 BST 2012
Rank | 91 | Aligned Residues | 19
% Identity | 37% | Template | d1k5ja_
SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Nucleoplasmin-like core domain | Nucleoplasmin-like core domain
Resolution | 2.30

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | V | T | P | P | A | C | F | T | A | E | G | P | G | L | G | P | A | R | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Sequence |  | E | L | T | P | P | V | T | F | R | L | K | . | A | G | S | G | P | L | Y | I
Template Known Secondary structure |  |  |  |  | S |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 95 | . | . | . | . | 100 | . | . | . | . | . |  | . | . | . | . | 110 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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