 |
| Job Description | A0FGR9 | | Confidence | 99.86% | Date | Thu Apr 26 09:38:06 BST 2012 |
| Rank | 25 | Aligned Residues | 127 |
| % Identity | 36% | Template | d1dqva1 |
| SCOP info | C2 domain-like
| C2 domain (Calcium/lipid-binding domain, CaLB)
| Synaptotagmin-like (S variant)
|
| Resolution | 3.20 |
|
 |
|   |   |
752 | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | |
. | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | R | Q | L | G | E | I | Q | L | T | V | R | Y | V | C | L | R | R | C | L | S | V | L | I | N | G | C | R | N | L | T | P | C | T | S | S | G | . |
A | D | P | Y | V | R | V | Y | L | L | P | E | R | K | W | A | C | R | K | K | T | S | V | K | R | K | T | L | E | P | L | F | D | E | T | F | E | F | F | V | P | M |
| Query Conservation |   |
  |   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|
|   |
|   |
|   |
|
| . |
|
|
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
G | A | P | C | G | R | I | S | F | A | L | R | Y | L | Y | G | S | D | Q | L | V | V | R | I | L | Q | A | L | D | L | P | A | K | D | S | N | G | F | S | D | P | Y | V | K | I | Y | L | L | P | D | R | K | K | . |
. |
K | F | Q | T | K | V | H | R | K | T | L | N | P | I | F | N | E | T | F | Q | F | S | V | P | L |
| Template Known Secondary structure |   |
|
| S | S |
|  |  |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| S | T | T | S |
|
|
|  |  |  |  |  |  |
| T | T | S | T | T | S | . | . |
|  |  |
|
|
|
|
| S |
| S | S |
|  |  |  |  |  |  |  |  |  |
|
| G |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | |
|
. | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . |
|   |
|   |   |
831 | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | |
|
. | . | . | . | . | . | . | . | 880 | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|
|
|
| . | . |
|
|  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | E | V | K | K | R | S | L | D | V | A | V | K | N | S | R | P | L | G | S | H | R | R | K | E | L | G | K | V | L | I | D | L | S | K | E | D | L | I | K | G | . |
. |
F | S | Q | W | Y | E | L | T | P | N | G |
| Query Conservation |   |
  |
|
|   |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|   |
|   |
|
|   |   | . | . |   |   |   |
|
|   |
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   | . | . |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
| Template Sequence |   |
A | E | L | A | Q | R | K | L | H | F | S | V | Y | D | F | D | R | F | S | . |
. |
R | H | D | L | I | G | Q | V | V | L | D | N | L | L | E | L | A | E | Q | P | P | D | R | P | L | W | R | D | I | L | E | G | G |
| Template Known Secondary structure |   |
G | G | G | S | S |
|
|
|  |  |  |  |  |  |
|
| S | S | S | . | . |
|
|
|  |  |  |  |  |  |
|
|
| T | T | G | G | G | S | S |
| S | S |
|
|
|
|  |  |
| B |
|
|
|
| Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | |
|
. | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|