Job Description A0FGR9 Confidence 99.86% Date Thu Apr 26 09:38:06 BST 2012 Rank 22 Aligned Residues 114 % Identity 33% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

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		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		P	L	P	C	G	V	I	R	V	H	L	L	E	A	E	Q	L	A	Q	K	D	N	F	L	G	L	R	G	K	S	D	P	Y	A	K	V	S	I	G	L	.	.	.	.	.	.	Q	H	F	R	S	R	T	I	Y	R	N	L	N	P	T	W	N	E	V	F	E	F	M	V	Y	E	V	P	G	Q	D	L	E	V
Query Conservation																																										.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.															.	.	.	.	.	.																												.
Template Conservation																					.	.	.	.	.	.	.																																																.
Template Sequence		N	D	D	T	R	V	V	R	V	K	V	I	A	G	I	G	L	A	I	.	.	.	.	.	.	.	L	G	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	N	E	E	I	L	F	R	V	L	P	Q	.	R	H	R	I	L	F
Template Known Secondary structure			T	T													S				.	.	.	.	.	.	.															T	T	T												S	S		S	S													T	T	.	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.																																																.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410						.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		D	L	Y	D	E	D	T	D	R	D	D	F	L	G	S	L	Q	I	C	L	G	D	V	M	T	N	R	V	V	D	E	W	F	V	L	.	.	.	.	.	N	D	T	T	S	G	R	L	H	L	R	L	E	W	L	S
Query Conservation																																					.	.	.	.	.
Alig confidence								.	.	.																											.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		E	V	F	D	E	N	.	.	.	D	D	F	L	G	Q	V	D	V	P	L	Y	P	L	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S	R	V	K	G	Y	L	R	L	K	M	T	Y	L	P
Template Known Secondary structure								.	.	.											S		S			B											B		S	S	T	T					S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions