Job Description A0FGR9 Confidence 99.84% Date Thu Apr 26 09:38:06 BST 2012 Rank 34 Aligned Residues 113 % Identity 23% Template c3l9bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:otoferlin; PDBTitle: crystal structure of rat otoferlin c2a Resolution 1.95 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																																	.																.	.
Query SS confidence																																																	.																.	.
Query Sequence		G	V	I	R	V	H	L	L	E	A	E	Q	L	A	Q	K	D	N	F	L	G	L	R	G	K	S	D	P	Y	A	K	V	S	I	G	L	Q	H	F	R	S	R	T	I	Y	R	N	.	L	N	P	T	W	N	E	V	F	E	F	M	V	Y	E	.	.	V	P	G	Q	D	L	E	V	D	L	Y	D	E	D	T
Query Conservation																																																	.																.	.
Alig confidence																.	.	.	.	.	.	.	.	.																									.																.	.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		M	A	L	I	V	H	L	K	T	V	S	E	L	R	.	.	.	.	.	.	.	.	.	G	R	A	D	R	I	A	K	V	T	F	R	G	Q	S	F	Y	S	R	V	L	E	N	C	E	D	V	A	D	F	D	E	T	F	R	W	P	V	A	S	S	I	D	R	N	E	V	L	E	I	Q	I	F	N	Y	S	K
Template Known Secondary structure													S			.	.	.	.	.	.	.	.	.	S											T	T													S													S	S				T	T												T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
			383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.					.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure		.																																		.	.	.	.
Query SS confidence		.																																		.	.	.	.
Query Sequence		.	D	R	D	D	F	L	G	S	L	Q	I	C	L	G	D	V	M	T	N	R	V	V	D	E	W	F	V	L	N	D	T	T	S	.	.	.	.	G	R	L	H	L	R	L	E	W	L	S	L
Query Conservation		.																																		.	.	.	.
Alig confidence		.																																		.	.	.	.
Template Conservation
Template Sequence		V	F	S	N	K	L	I	G	T	F	R	M	V	L	Q	K	V	V	E	E	N	R	V	E	V	S	D	T	L	I	D	D	N	N	A	I	I	K	T	S	L	S	M	E	V	R	Y	Q	A	A
Template Known Secondary structure		T	S												S							S											T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions