Return to main results Retrieve Phyre Job Id

Job DescriptionA0FGR9
Confidence99.81%DateThu Apr 26 09:38:06 BST 2012
Rank37Aligned Residues111
% Identity35%Templatec3kwtA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:munc13-1; PDBTitle: munc13-1 c2b-domain, calcium-free
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   306...310.........320.........330.........340.........350.........360.........370. ........380.. .
Predicted Secondary structure 






























.


.
Query SS confidence 

































































.










.
Query Sequence  GVIRVHLLEAEQLAQKDNFLGLRGKSDPYAKVSIGLQHFRSRTIYRNLNPTWNEVFEFMVYEVPGQ. DLEVDLYDEDT. D
Query Conservation 


 
 
  
  
   
      
 




 
  
     
 

  



 




   
      . 
 
 
 
 
 . 
Alig confidence 
















......










































.










.
Template Conservation    
 
 
  
  
    ......
  



 
        
        
   
 
 
                      
Template Sequence  AKISITVVCAQGLQAKD. . . . . . GSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKE
Template Known Secondary structure  S




......



TT




S
SS


TT


S



Template Predicted Secondary structure 






......

























Template SS confidence 















































































   689690.........700..... ....710.........720.........730.........740.........750.........760..
 
   384.....390.........400.........410.........420....
Predicted Secondary structure 















Query SS confidence 








































Query Sequence  RDDFLGSLQICLGDVMTNRVVDEWFVLNDTTSGRLHLRLEW
Query Conservation   

 

   
 
  
        
  
     
 
   
  
Alig confidence 

















..




















Template Conservation      

   
 
  
   ..   
  
     
 
 
 
  
Template Sequence  SDDFLGQTIIEVRTLSGE. . MDVWYNLDKRVSGAIRLHISV
Template Known Secondary structure 

GGG

S..
B




Template Predicted Secondary structure 






..







Template SS confidence 








































   774.....780.........790. ........800.........810..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions