Job Description A0FGR9 Confidence 99.76% Date Thu Apr 26 09:38:06 BST 2012 Rank 45 Aligned Residues 118 % Identity 32% Template c2nsqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4-like protein; PDBTitle: crystal structure of the c2 domain of the human e3 ubiquitin-protein2 ligase nedd4-like protein Resolution 1.85 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.								340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		R	F	P	L	P	C	G	V	I	R	V	H	L	L	E	A	E	Q	L	A	Q	K	D	N	F	L	G	L	R	G	K	S	D	P	Y	A	K	V	S	I	.	.	.	.	.	.	.	G	L	Q	H	F	R	S	R	T	I	Y	R	N	L	N	P	T	W	N	E	V	F	E	F	M	V	Y	E	V	P	G	Q	D
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.													.	.	.	.	.	.	.																														.
Template Conservation																						.	.	.	.	.	.	.	.																																																	.
Template Sequence		E	D	E	G	E	S	R	I	L	R	V	K	V	V	S	G	I	D	L	A	.	.	.	.	.	.	.	.	K	K	A	S	D	P	Y	V	K	L	S	L	Y	V	A	D	E	N	R	E	L	A	L	V	Q	T	K	T	I	K	K	T	L	N	P	K	W	N	E	E	F	Y	F	R	V	N	P	S	.	N	H	R
Template Known Secondary structure		S		T	T	T													S			.	.	.	.	.	.	.	.															T	T	T	T												S	S		S	S													T	T	.	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.																																																	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.
		373	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.						.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure												.																		.																	.	.	.	.	.
Query SS confidence												.																		.																	.	.	.	.	.
Query Sequence		L	E	V	D	L	Y	D	E	D	T	.	D	R	D	D	F	L	G	S	L	Q	I	C	L	G	D	V	M	.	T	N	R	V	V	D	E	W	F	V	L	N	D	T	T	S	.	.	.	.	.	G	R	L	H	L	R	L	E	W	L	S
Query Conservation												.																		.																	.	.	.	.	.
Alig confidence												.																		.																	.	.	.	.	.
Template Conservation
Template Sequence		L	L	F	E	V	F	D	E	N	R	L	T	R	D	D	F	L	G	Q	V	D	V	P	L	S	H	L	P	T	E	D	P	Y	T	F	K	D	F	L	L	R	P	R	S	H	K	S	R	V	K	G	F	L	R	L	K	M	A	Y	M	P
Template Known Secondary structure											S	S	S													T	T			B												B		S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions