Job Description A0FGR9 Confidence 99.78% Date Thu Apr 26 09:38:06 BST 2012 Rank 39 Aligned Residues 114 % Identity 22% Template c2nq3A_ PDB info PDB header:ligase Chain: A: PDB Molecule:itchy homolog e3 ubiquitin protein ligase; PDBTitle: crystal structure of the c2 domain of human itchy homolog2 e3 ubiquitin protein ligase Resolution 1.80 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		G	V	I	R	V	H	L	L	E	A	E	Q	L	A	Q	K	D	N	F	L	G	L	R	G	K	S	D	P	Y	A	K	V	S	I	G	L	Q	H	F	R	S	R	T	I	Y	R	N	L	N	P	T	W	N	E	V	F	E	F	M	V	Y	E	V	P	G	Q	D	L	E	V	D	L	Y	D	E	D	T	.	D	R
Query Conservation																																																																															.
Alig confidence													.							.	.	.	.	.																																							.	.															.
Template Conservation													.							.	.	.	.	.																																							.	.
Template Sequence		S	Q	L	Q	I	T	V	I	S	A	K	.	L	K	E	N	K	W	.	.	.	.	.	F	G	P	S	P	Y	V	E	V	T	V	D	G	Q	S	K	K	T	E	K	C	N	N	T	N	S	P	K	W	K	Q	P	L	T	V	I	V	T	.	.	P	V	S	K	L	H	F	R	V	W	S	H	Q	T	L	K	S
Template Known Secondary structure													.							.	.	.	.	.												T	T									S	S		S	S													.	.	T	T												S	S	S
Template Predicted Secondary structure													.							.	.	.	.	.																																							.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.						.	.	.	.	.	.	.	.	410						.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.										.	.	.	.	.
Query SS confidence																			.	.	.	.	.										.	.	.	.	.
Query Sequence		D	D	F	L	G	S	L	Q	I	C	L	G	D	V	M	T	N	.	.	.	.	.	R	V	V	D	E	W	F	V	L	.	.	.	.	.	N	D	T	T	S	G	R	L	H	L	R	L	E	W	L	S	L
Query Conservation																			.	.	.	.	.										.	.	.	.	.
Alig confidence																			.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		D	V	L	L	G	T	A	A	L	D	I	Y	E	T	L	K	S	N	N	M	K	L	E	E	V	V	V	T	L	Q	L	G	G	D	K	E	P	T	E	T	I	G	D	L	S	I	C	L	D	G	L	Q	L
Template Known Secondary structure																			T	T	T			S	S										S	S		T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions