Test System : OXIDOREDUCTASE/ELECTRON TRANSPORT

Description
PDB Code
Resolution
SCOP domain(s)
ComplexYEAST CYTOCHROME C PEROXIDASE (CCP) COMPLEX WITH YEAST ISO-1-CYTOCHROME C
2PCC
2.30
d2pcca_ + d2pccb_
Component 1CYTOCHROME C PEROXIDASE (CCP-MKT) WILD TYPE
1CCA
1.80
d1cca__
Component 2CYTOCHROME C (ISOZYME 1) (REDUCED)
1YCC
1.23
d1ycc__

RMSD best possible fit of...
(Angstroms)
Whole Complex
Interface
All atomsC alpha atomsAll atomsC alpha atoms
Component 1 alone
0.8397
0.3537
1.0890
0.4945
Component 2 alone
1.0561
0.4917
0.9208
0.3159
Combined Components
0.9021
0.3959
1.0162
0.4220

Parsed coordinates
These are not exactly the same as the original PDB files in that they have been run through our PDB parser, which does various things such as remove alternative atoms. They may also have had their chain IDs changed so that the components match. Any other changes such as truncations are noted in the box below.

Complex
Component 1
Component 2
truncated first 3 residues of 2pcc
removed following two atoms from 2pcc
89 NZ LYS A 12
2097 NZ LYS A 260

Decoy set ( gzipped tarball )